Analysis of Ligand-Protein Contacts in PDB entry:
8BRN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 194 ligands in PDB entry 8BRN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 12
FUC
G
4 10ALPHA-L-FUCOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 18
FUC
H
6 10ALPHA-L-FUCOPYRANOSE
lig 19
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 22
FUC
I
4 10ALPHA-L-FUCOPYRANOSE
lig 23
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 28
FUC
J
6 10ALPHA-L-FUCOPYRANOSE
lig 29
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 34
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 35
FUC
L
5 10ALPHA-L-FUCOPYRANOSE
lig 36
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 39
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 42
FUC
N
4 10ALPHA-L-FUCOPYRANOSE
lig 43
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 48
FUC
P
4 10ALPHA-L-FUCOPYRANOSE
lig 49
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
R
3 10BETA-D-MANNOPYRANOSE
lig 54
FUC
R
4 10ALPHA-L-FUCOPYRANOSE
lig 55
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 58
FUC
S
4 10ALPHA-L-FUCOPYRANOSE
lig 59
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
FUC
T
2 10ALPHA-L-FUCOPYRANOSE
lig 61
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 64
FUC
V
4 10ALPHA-L-FUCOPYRANOSE
lig 65
ZN
A
501 1ZINC ION
lig 66
FE
A
502 1FE (III) ION
lig 67
FLC
A
503 13CITRATE ANION
lig 68
PGE
A
504 10TRIETHYLENE GLYCOL
lig 69
FLC
A
505 13CITRATE ANION
lig 70
NAG
A
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
PGE
A
507 7TRIETHYLENE GLYCOL
lig 72
SO4
A
508 5SULFATE ION
lig 73
SO4
A
509 5SULFATE ION
lig 74
SO4
A
510 5SULFATE ION
lig 75
SO4
A
511 5SULFATE ION
lig 76
SO4
A
512 5SULFATE ION
lig 77
SO4
A
513 5SULFATE ION
lig 78
EDO
A
514 41,2-ETHANEDIOL
lig 79
GOL
A
515 6GLYCEROL
lig 80
GOL
A
516 6GLYCEROL
lig 81
GOL
A
517 6GLYCEROL
lig 82
GOL
A
518 6GLYCEROL
lig 83
GOL
A
519 6GLYCEROL
lig 84
GOL
A
520 6GLYCEROL
lig 85
GOL
A
521 6GLYCEROL
lig 86
GOL
A
522 6GLYCEROL
lig 87
GOL
A
523 6GLYCEROL
lig 88
GOL
A
524 6GLYCEROL
lig 89
GOL
A
525 6GLYCEROL
lig 90
GOL
A
526 6GLYCEROL
lig 91
GOL
A
527 6GLYCEROL
lig 92
CL
A
528 1CHLORIDE ION
lig 93
CL
A
529 1CHLORIDE ION
lig 94
FLC
A
530 13CITRATE ANION
lig 95
GOL
A
531 6GLYCEROL
lig 96
R9X
A
532 27 ACID
lig 97
ZN
B
501 1ZINC ION
lig 98
FE
B
502 1FE (III) ION
lig 99
FLC
B
503 13CITRATE ANION
lig 100
PGE
B
504 10TRIETHYLENE GLYCOL
lig 101
FLC
B
505 13CITRATE ANION
lig 102
FLC
B
506 13CITRATE ANION
lig 103
FLC
B
507 13CITRATE ANION
lig 104
PGE
B
508 10TRIETHYLENE GLYCOL
lig 105
SO4
B
509 5SULFATE ION
lig 106
SO4
B
510 5SULFATE ION
lig 107
SO4
B
511 5SULFATE ION
lig 108
SO4
B
512 5SULFATE ION
lig 109
SO4
B
513 5SULFATE ION
lig 110
SO4
B
514 5SULFATE ION
lig 111
SO4
B
515 5SULFATE ION
lig 112
SO4
B
516 5SULFATE ION
lig 113
SO4
B
517 5SULFATE ION
lig 114
EDO
B
518 41,2-ETHANEDIOL
lig 115
GOL
B
519 6GLYCEROL
lig 116
GOL
B
520 6GLYCEROL
lig 117
GOL
B
521 6GLYCEROL
lig 118
GOL
B
522 6GLYCEROL
lig 119
GOL
B
523 6GLYCEROL
lig 120
GOL
B
524 6GLYCEROL
lig 121
GOL
B
525 6GLYCEROL
lig 122
GOL
B
526 6GLYCEROL
lig 123
GOL
B
527 6GLYCEROL
lig 124
GOL
B
528 6GLYCEROL
lig 125
CL
B
529 1CHLORIDE ION
lig 126
NA
B
530 1SODIUM ION
lig 127
R9X
B
531 27 ACID
lig 128
FLC
C
601 13CITRATE ANION
lig 129
FLC
C
602 13CITRATE ANION
lig 130
FLC
C
603 13CITRATE ANION
lig 131
PGE
C
604 10TRIETHYLENE GLYCOL
lig 132
NAG
C
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
ZN
C
606 1ZINC ION
lig 134
FE
C
607 1FE (III) ION
lig 135
SO4
C
608 5SULFATE ION
lig 136
SO4
C
609 5SULFATE ION
lig 137
SO4
C
610 5SULFATE ION
lig 138
SO4
C
611 5SULFATE ION
lig 139
SO4
C
612 5SULFATE ION
lig 140
SO4
C
613 5SULFATE ION
lig 141
SO4
C
614 5SULFATE ION
lig 142
SO4
C
615 5SULFATE ION
lig 143
NAG
C
616 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 144
EDO
C
617 41,2-ETHANEDIOL
lig 145
GOL
C
618 6GLYCEROL
lig 146
GOL
C
619 6GLYCEROL
lig 147
GOL
C
620 6GLYCEROL
lig 148
GOL
C
621 6GLYCEROL
lig 149
GOL
C
622 6GLYCEROL
lig 150
GOL
C
623 6GLYCEROL
lig 151
GOL
C
624 6GLYCEROL
lig 152
GOL
C
625 6GLYCEROL
lig 153
CL
C
626 1CHLORIDE ION
lig 154
FLC
C
627 13CITRATE ANION
lig 155
FLC
C
628 13CITRATE ANION
lig 156
GOL
C
629 6GLYCEROL
lig 157
GOL
C
630 6GLYCEROL
lig 158
GOL
C
631 6GLYCEROL
lig 159
R9X
C
632 27 ACID
lig 160
ZN
D
501 1ZINC ION
lig 161
FE
D
502 1FE (III) ION
lig 162
FLC
D
503 13CITRATE ANION
lig 163
PGE
D
504 10TRIETHYLENE GLYCOL
lig 164
DMS
D
505 4DIMETHYL SULFOXIDE
lig 165
NAG
D
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 166
SO4
D
507 5SULFATE ION
lig 167
SO4
D
508 5SULFATE ION
lig 168
SO4
D
509 5SULFATE ION
lig 169
SO4
D
510 5SULFATE ION
lig 170
SO4
D
511 5SULFATE ION
lig 171
SO4
D
512 5SULFATE ION
lig 172
SO4
D
513 5SULFATE ION
lig 173
SO4
D
514 5SULFATE ION
lig 174
SO4
D
515 5SULFATE ION
lig 175
NAG
D
516 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 176
EDO
D
517 41,2-ETHANEDIOL
lig 177
GOL
D
518 6GLYCEROL
lig 178
GOL
D
519 6GLYCEROL
lig 179
GOL
D
520 6GLYCEROL
lig 180
GOL
D
521 6GLYCEROL
lig 181
GOL
D
522 6GLYCEROL
lig 182
GOL
D
523 6GLYCEROL
lig 183
GOL
D
524 6GLYCEROL
lig 184
GOL
D
525 6GLYCEROL
lig 185
GOL
D
526 6GLYCEROL
lig 186
GOL
D
527 6GLYCEROL
lig 187
GOL
D
528 6GLYCEROL
lig 188
GOL
D
529 6GLYCEROL
lig 189
CL
D
530 1CHLORIDE ION
lig 190
CL
D
531 1CHLORIDE ION
lig 191
GOL
D
532 6GLYCEROL
lig 192
GOL
D
533 6GLYCEROL
lig 193
GOL
D
534 6GLYCEROL
lig 194
R9X
D
535 27 ACID