Analysis of Ligand-Protein Contacts in PDB entry:
8C3F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 8C3F. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
L
301 41,2-ETHANEDIOL
lig 2
EDO
L
302 41,2-ETHANEDIOL
lig 3
DIO
L
303 61,4-DIETHYLENE DIOXIDE
lig 4
HTO
L
304 10HEPTANE-1,2,3-TRIOL
lig 5
BCL
L
305 66BACTERIOCHLOROPHYLL A
lig 6
BPB
L
306 65BACTERIOPHEOPHYTIN B
lig 7
U10
L
307 48UBIQUINONE-10
lig 8
PO4
L
308 5PHOSPHATE ION
lig 9
PO4
L
309 5PHOSPHATE ION
lig 10
GOL
L
310 6GLYCEROL
lig 11
LDA
L
311 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 12
LDA
L
312 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 13
BCL
L
313 66BACTERIOCHLOROPHYLL A
lig 14
EDO
M
401 41,2-ETHANEDIOL
lig 15
HTO
M
402 10HEPTANE-1,2,3-TRIOL
lig 16
BCL
M
403 66BACTERIOCHLOROPHYLL A
lig 17
LDA
M
404 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 18
EDO
M
405 41,2-ETHANEDIOL
lig 19
BCL
M
406 66BACTERIOCHLOROPHYLL A
lig 20
BPB
M
407 65BACTERIOPHEOPHYTIN B
lig 21
FE
M
408 1FE (III) ION
lig 22
U10
M
409 48UBIQUINONE-10
lig 23
SPN
M
410 43SPEROIDENONE
lig 24
K
M
411 1POTASSIUM ION
lig 25
CL
M
412 1CHLORIDE ION
lig 26
PO4
M
413 5PHOSPHATE ION
lig 27
CDL
M
414 81CARDIOLIPIN
lig 28
LDA
M
415 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 29
LDA
M
416 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 30
LDA
M
417 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 31
LDA
M
418 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 32
EDO
M
419 41,2-ETHANEDIOL
lig 33
EDO
H
301 41,2-ETHANEDIOL
lig 34
EDO
H
302 41,2-ETHANEDIOL
lig 35
TRS
H
303 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 36
LDA
H
304 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 37
K
H
305 1POTASSIUM ION