Analysis of Ligand-Protein Contacts in PDB entry:
8C88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 8C88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NKP
H
301 29 ENOATE
lig 2
LDA
H
302 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 3
UNL
H
303 12UNKNOWN LIGAND
lig 4
UNL
H
304 12UNKNOWN LIGAND
lig 5
UNL
H
305 15UNKNOWN LIGAND
lig 6
OLC
L
501 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 7
BCL
L
502 66BACTERIOCHLOROPHYLL A
lig 8
BCL
L
503 66BACTERIOCHLOROPHYLL A
lig 9
BPH
L
504 65BACTERIOPHEOPHYTIN A
lig 10
UNL
L
505 12UNKNOWN LIGAND
lig 11
UNL
L
506 15UNKNOWN LIGAND
lig 12
UNL
L
507 10UNKNOWN LIGAND
lig 13
DIO
L
508 61,4-DIETHYLENE DIOXIDE
lig 14
EDO
L
509 41,2-ETHANEDIOL
lig 15
EDO
L
510 41,2-ETHANEDIOL
lig 16
EDO
L
511 41,2-ETHANEDIOL
lig 17
NKP
M
401 29 ENOATE
lig 18
BCL
M
402 66BACTERIOCHLOROPHYLL A
lig 19
BCL
M
403 66BACTERIOCHLOROPHYLL A
lig 20
BPH
M
404 65BACTERIOPHEOPHYTIN A
lig 21
FE
M
405 1FE (III) ION
lig 22
U10
M
406 48UBIQUINONE-10
lig 23
SPN
M
407 43SPEROIDENONE
lig 24
LDA
M
408 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 25
LDA
M
409 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 26
LDA
M
410 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 27
LDA
M
411 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 28
UNL
M
412 12UNKNOWN LIGAND
lig 29
PO4
M
413 5PHOSPHATE ION
lig 30
PO4
M
414 5PHOSPHATE ION
lig 31
LDA
M
415 16LAURYL DIMETHYLAMINE-N-OXIDE