Analysis of Ligand-Protein Contacts in PDB entry:
8CGS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 60 ligands in PDB entry 8CGS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MGD
A
5001 47 DINUCLEOTIDE
lig 2
MGD
A
5002 47 DINUCLEOTIDE
lig 3
O
A
5003 1OXYGEN ATOM
lig 4
4MO
A
5004 1MOLYBDENUM(IV) ION
lig 5
F3S
A
5005 7FE3-S4 CLUSTER
lig 6
PEG
A
5006 7DI(HYDROXYETHYL)ETHER
lig 7
ACT
A
5007 4ACETATE ION
lig 8
PO4
A
5008 5PHOSPHATE ION
lig 9
ACT
A
5009 4ACETATE ION
lig 10
UJI
A
5010 5TETRAKIS(OXIDANYL)ANTIMONY
lig 11
PEG
A
5011 7DI(HYDROXYETHYL)ETHER
lig 12
PEG
A
5012 7DI(HYDROXYETHYL)ETHER
lig 13
CL
A
5013 1CHLORIDE ION
lig 14
CL
A
5014 1CHLORIDE ION
lig 15
GOL
A
5015 6GLYCEROL
lig 16
GOL
A
5016 6GLYCEROL
lig 17
TRS
A
5017 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 18
FES
B
201 4FE2/S2 (INORGANIC) CLUSTER
lig 19
MGD
C
5101 47 DINUCLEOTIDE
lig 20
MGD
C
5102 47 DINUCLEOTIDE
lig 21
O
C
5103 1OXYGEN ATOM
lig 22
4MO
C
5104 1MOLYBDENUM(IV) ION
lig 23
F3S
C
5105 7FE3-S4 CLUSTER
lig 24
PEG
C
5106 7DI(HYDROXYETHYL)ETHER
lig 25
PO4
C
5107 5PHOSPHATE ION
lig 26
GOL
C
5108 6GLYCEROL
lig 27
UJI
C
5109 5TETRAKIS(OXIDANYL)ANTIMONY
lig 28
PO4
C
5110 5PHOSPHATE ION
lig 29
CL
C
5111 1CHLORIDE ION
lig 30
TRS
C
5112 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 31
FES
D
201 4FE2/S2 (INORGANIC) CLUSTER
lig 32
MGD
E
5001 47 DINUCLEOTIDE
lig 33
MGD
E
5002 47 DINUCLEOTIDE
lig 34
O
E
5003 1OXYGEN ATOM
lig 35
4MO
E
5004 1MOLYBDENUM(IV) ION
lig 36
F3S
E
5005 7FE3-S4 CLUSTER
lig 37
PEG
E
5006 7DI(HYDROXYETHYL)ETHER
lig 38
PO4
E
5007 5PHOSPHATE ION
lig 39
GOL
E
5008 6GLYCEROL
lig 40
UJI
E
5009 5TETRAKIS(OXIDANYL)ANTIMONY
lig 41
EDO
E
5010 41,2-ETHANEDIOL
lig 42
PO4
E
5011 5PHOSPHATE ION
lig 43
EDO
E
5012 41,2-ETHANEDIOL
lig 44
CL
E
5013 1CHLORIDE ION
lig 45
CL
E
5014 1CHLORIDE ION
lig 46
SO4
E
5015 5SULFATE ION
lig 47
FES
F
201 4FE2/S2 (INORGANIC) CLUSTER
lig 48
MGD
G
5001 47 DINUCLEOTIDE
lig 49
MGD
G
5002 47 DINUCLEOTIDE
lig 50
O
G
5003 1OXYGEN ATOM
lig 51
4MO
G
5004 1MOLYBDENUM(IV) ION
lig 52
F3S
G
5005 7FE3-S4 CLUSTER
lig 53
TRS
G
5006 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 54
PEG
G
5007 7DI(HYDROXYETHYL)ETHER
lig 55
PO4
G
5008 5PHOSPHATE ION
lig 56
ACT
G
5009 4ACETATE ION
lig 57
UJI
G
5010 5TETRAKIS(OXIDANYL)ANTIMONY
lig 58
ACT
G
5011 4ACETATE ION
lig 59
NA
G
5012 1SODIUM ION
lig 60
FES
H
201 4FE2/S2 (INORGANIC) CLUSTER