Analysis of Ligand-Protein Contacts in PDB entry:
8CIX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 8CIX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
B
1 3ACETYL GROUP
lig 2
MVA
B
2 8N-METHYLVALINE
lig 3
MP8
B
3 8(4R)-4-METHYL-L-PROLINE
lig 4
NZC
B
4 8N-METHYLIDENE-L-THREONINE
lig 5
MP8
B
6 8(4R)-4-METHYL-L-PROLINE
lig 6
MVA
B
8 8N-METHYLVALINE
lig 7
MLU
B
10 9N-METHYL-D-LEUCINE
lig 8
GOL
A
401 6GLYCEROL
lig 9
CA
A
402 1CALCIUM ION
lig 10
CA
A
403 1CALCIUM ION
lig 11
CA
A
404 1CALCIUM ION
lig 12
CA
A
405 1CALCIUM ION
lig 13
CA
A
406 1CALCIUM ION
lig 14
CA
A
407 1CALCIUM ION
lig 15
CA
A
408 1CALCIUM ION
lig 16
ACT
A
409 4ACETATE ION
lig 17
ACT
A
410 4ACETATE ION
lig 18
ACT
A
411 4ACETATE ION
lig 19
MG
A
412 1MAGNESIUM ION
lig 20
MG
A
413 1MAGNESIUM ION
lig 21
MG
A
414 1MAGNESIUM ION
lig 22
MG
A
415 1MAGNESIUM ION
lig 23
NA
A
416 1SODIUM ION
lig 24
NA
A
417 1SODIUM ION
lig 25
NA
A
418 1SODIUM ION
lig 26
NA
A
419 1SODIUM ION
lig 27
NA
A
420 1SODIUM ION