Analysis of Ligand-Protein Contacts in PDB entry:
8CMO

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 332 ligands in PDB entry 8CMO. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	CL0	A	801	65	CHLOROPHYLL A ISOMER
lig 2	CLA	A	802	65	CHLOROPHYLL A
lig 3	CLA	A	803	65	CHLOROPHYLL A
lig 4	CLA	A	804	45	CHLOROPHYLL A
lig 5	CLA	A	805	65	CHLOROPHYLL A
lig 6	CLA	A	806	65	CHLOROPHYLL A
lig 7	CLA	A	807	60	CHLOROPHYLL A
lig 8	CLA	A	808	65	CHLOROPHYLL A
lig 9	CLA	A	809	55	CHLOROPHYLL A
lig 10	CLA	A	810	65	CHLOROPHYLL A
lig 11	CLA	A	811	65	CHLOROPHYLL A
lig 12	CLA	A	812	65	CHLOROPHYLL A
lig 13	CLA	A	813	65	CHLOROPHYLL A
lig 14	CLA	A	814	60	CHLOROPHYLL A
lig 15	CLA	A	815	65	CHLOROPHYLL A
lig 16	CLA	A	816	56	CHLOROPHYLL A
lig 17	CLA	A	817	60	CHLOROPHYLL A
lig 18	CLA	A	818	60	CHLOROPHYLL A
lig 19	CLA	A	819	65	CHLOROPHYLL A
lig 20	CLA	A	820	60	CHLOROPHYLL A
lig 21	CLA	A	821	65	CHLOROPHYLL A
lig 22	CLA	A	822	55	CHLOROPHYLL A
lig 23	CLA	A	823	65	CHLOROPHYLL A
lig 24	CLA	A	824	65	CHLOROPHYLL A
lig 25	CLA	A	825	65	CHLOROPHYLL A
lig 26	CLA	A	826	50	CHLOROPHYLL A
lig 27	CLA	A	827	65	CHLOROPHYLL A
lig 28	CLA	A	828	65	CHLOROPHYLL A
lig 29	CLA	A	829	65	CHLOROPHYLL A
lig 30	CLA	A	830	65	CHLOROPHYLL A
lig 31	CLA	A	831	50	CHLOROPHYLL A
lig 32	CLA	A	832	65	CHLOROPHYLL A
lig 33	CLA	A	833	65	CHLOROPHYLL A
lig 34	CLA	A	834	65	CHLOROPHYLL A
lig 35	CLA	A	835	65	CHLOROPHYLL A
lig 36	CLA	A	836	55	CHLOROPHYLL A
lig 37	CLA	A	837	51	CHLOROPHYLL A
lig 38	CLA	A	838	65	CHLOROPHYLL A
lig 39	CLA	A	839	51	CHLOROPHYLL A
lig 40	CLA	A	840	65	CHLOROPHYLL A
lig 41	CLA	A	841	65	CHLOROPHYLL A
lig 42	CLA	A	842	52	CHLOROPHYLL A
lig 43	PQN	A	843	33	PHYLLOQUINONE
lig 44	BCR	A	844	40	BETA-CAROTENE
lig 45	BCR	A	845	40	BETA-CAROTENE
lig 46	BCR	A	846	40	BETA-CAROTENE
lig 47	BCR	A	847	40	BETA-CAROTENE
lig 48	BCR	A	848	40	BETA-CAROTENE
lig 49	LHG	A	849	35	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 50	LHG	A	850	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 51	NKP	A	851	23	ENOATE
lig 52	DGA	A	852	40	DIACYL GLYCEROL
lig 53	OCA	A	853	10	OCTANOIC ACID (CAPRYLIC ACID)
lig 54	CLA	A	854	65	CHLOROPHYLL A
lig 55	CLA	A	855	65	CHLOROPHYLL A
lig 56	BCR	A	856	40	BETA-CAROTENE
lig 57	CLA	B	801	65	CHLOROPHYLL A
lig 58	SF4	B	802	8	IRON/SULFUR CLUSTER
lig 59	LHG	B	803	33	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 60	CA	B	804	1	CALCIUM ION
lig 61	CLA	B	805	65	CHLOROPHYLL A
lig 62	CLA	B	806	65	CHLOROPHYLL A
lig 63	CLA	B	807	45	CHLOROPHYLL A
lig 64	CLA	B	808	65	CHLOROPHYLL A
lig 65	CLA	B	809	65	CHLOROPHYLL A
lig 66	CLA	B	810	56	CHLOROPHYLL A
lig 67	CLA	B	811	65	CHLOROPHYLL A
lig 68	CLA	B	812	60	CHLOROPHYLL A
lig 69	CLA	B	813	56	CHLOROPHYLL A
lig 70	CLA	B	814	60	CHLOROPHYLL A
lig 71	CLA	B	815	65	CHLOROPHYLL A
lig 72	CLA	B	816	60	CHLOROPHYLL A
lig 73	CLA	B	817	57	CHLOROPHYLL A
lig 74	CLA	B	818	65	CHLOROPHYLL A
lig 75	CLA	B	819	59	CHLOROPHYLL A
lig 76	CLA	B	820	60	CHLOROPHYLL A
lig 77	CLA	B	821	65	CHLOROPHYLL A
lig 78	CLA	B	822	56	CHLOROPHYLL A
lig 79	CLA	B	823	55	CHLOROPHYLL A
lig 80	CLA	B	824	59	CHLOROPHYLL A
lig 81	CLA	B	825	65	CHLOROPHYLL A
lig 82	CLA	B	826	65	CHLOROPHYLL A
lig 83	CLA	B	827	65	CHLOROPHYLL A
lig 84	CLA	B	828	65	CHLOROPHYLL A
lig 85	CLA	B	829	57	CHLOROPHYLL A
lig 86	CLA	B	830	65	CHLOROPHYLL A
lig 87	CLA	B	831	58	CHLOROPHYLL A
lig 88	CLA	B	832	50	CHLOROPHYLL A
lig 89	CLA	B	833	65	CHLOROPHYLL A
lig 90	CLA	B	834	58	CHLOROPHYLL A
lig 91	CLA	B	835	51	CHLOROPHYLL A
lig 92	CLA	B	836	45	CHLOROPHYLL A
lig 93	CLA	B	837	51	CHLOROPHYLL A
lig 94	CLA	B	838	65	CHLOROPHYLL A
lig 95	CLA	B	839	52	CHLOROPHYLL A
lig 96	CLA	B	840	65	CHLOROPHYLL A
lig 97	CLA	B	841	65	CHLOROPHYLL A
lig 98	CLA	B	842	65	CHLOROPHYLL A
lig 99	PQN	B	843	33	PHYLLOQUINONE
lig 100	BCR	B	844	40	BETA-CAROTENE
lig 101	BCR	B	845	40	BETA-CAROTENE
lig 102	BCR	B	846	40	BETA-CAROTENE
lig 103	BCR	B	847	40	BETA-CAROTENE
lig 104	BCR	B	848	40	BETA-CAROTENE
lig 105	BCR	B	849	40	BETA-CAROTENE
lig 106	LHG	B	850	23	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 107	LHG	B	851	20	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 108	DGD	B	852	61	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 109	BCR	B	853	40	BETA-CAROTENE
lig 110	SF4	C	101	8	IRON/SULFUR CLUSTER
lig 111	SF4	C	102	8	IRON/SULFUR CLUSTER
lig 112	CLA	F	301	65	CHLOROPHYLL A
lig 113	CLA	F	302	65	CHLOROPHYLL A
lig 114	BCR	F	303	40	BETA-CAROTENE
lig 115	CLA	F	304	65	CHLOROPHYLL A
lig 116	CLA	F	305	45	CHLOROPHYLL A
lig 117	RRX	F	306	41	(3R)-BETA,BETA-CAROTEN-3-OL
lig 118	LMT	F	307	35	DODECYL-BETA-D-MALTOSIDE
lig 119	LMG	F	308	35	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 120	CLA	G	201	50	CHLOROPHYLL A
lig 121	CLA	G	202	46	CHLOROPHYLL A
lig 122	BCR	G	203	40	BETA-CAROTENE
lig 123	LMT	G	204	35	DODECYL-BETA-D-MALTOSIDE
lig 124	BCR	I	4001	40	BETA-CAROTENE
lig 125	LMG	J	101	29	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 126	T7X	J	102	49	PHOSPHATIDYLINOSITOL
lig 127	CLA	J	103	42	CHLOROPHYLL A
lig 128	BCR	J	104	40	BETA-CAROTENE
lig 129	C7Z	J	105	42	NONAENYL]CYCLOHEX-3-EN-1-OL
lig 130	DAO	K	201	14	LAURIC ACID
lig 131	CLA	K	202	46	CHLOROPHYLL A
lig 132	CLA	K	203	55	CHLOROPHYLL A
lig 133	CLA	K	204	49	CHLOROPHYLL A
lig 134	CLA	K	205	55	CHLOROPHYLL A
lig 135	BCR	K	206	40	BETA-CAROTENE
lig 136	CLA	L	201	65	CHLOROPHYLL A
lig 137	CLA	L	202	65	CHLOROPHYLL A
lig 138	CLA	L	203	50	CHLOROPHYLL A
lig 139	BCR	L	204	40	BETA-CAROTENE
lig 140	LMT	1	301	35	DODECYL-BETA-D-MALTOSIDE
lig 141	LUT	1	302	42	CAROTENE-3,3'-DIOL
lig 142	LUT	1	303	42	CAROTENE-3,3'-DIOL
lig 143	CLA	1	304	65	CHLOROPHYLL A
lig 144	CLA	1	305	45	CHLOROPHYLL A
lig 145	CLA	1	306	65	CHLOROPHYLL A
lig 146	CLA	1	307	60	CHLOROPHYLL A
lig 147	CLA	1	308	55	CHLOROPHYLL A
lig 148	CLA	1	309	61	CHLOROPHYLL A
lig 149	CLA	1	310	60	CHLOROPHYLL A
lig 150	CLA	1	311	46	CHLOROPHYLL A
lig 151	CHL	1	312	48	CHLOROPHYLL B
lig 152	CLA	1	313	65	CHLOROPHYLL A
lig 153	CLA	1	314	65	CHLOROPHYLL A
lig 154	CLA	1	315	46	CHLOROPHYLL A
lig 155	CLA	1	316	65	CHLOROPHYLL A
lig 156	LHG	1	317	43	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 157	SQD	1	318	48	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 158	DGD	1	319	51	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 159	LUT	Z	301	42	CAROTENE-3,3'-DIOL
lig 160	LUT	Z	302	42	CAROTENE-3,3'-DIOL
lig 161	CLA	Z	303	65	CHLOROPHYLL A
lig 162	CLA	Z	304	45	CHLOROPHYLL A
lig 163	CLA	Z	305	56	CHLOROPHYLL A
lig 164	CLA	Z	306	60	CHLOROPHYLL A
lig 165	CLA	Z	307	55	CHLOROPHYLL A
lig 166	CLA	Z	308	61	CHLOROPHYLL A
lig 167	CLA	Z	309	60	CHLOROPHYLL A
lig 168	CLA	Z	310	50	CHLOROPHYLL A
lig 169	CHL	Z	311	51	CHLOROPHYLL B
lig 170	CHL	Z	312	48	CHLOROPHYLL B
lig 171	CLA	Z	313	65	CHLOROPHYLL A
lig 172	CLA	Z	314	51	CHLOROPHYLL A
lig 173	CLA	Z	315	46	CHLOROPHYLL A
lig 174	CLA	Z	316	65	CHLOROPHYLL A
lig 175	LHG	Z	317	43	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 176	DGD	3	301	51	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 177	LUT	3	302	42	CAROTENE-3,3'-DIOL
lig 178	LUT	3	303	42	CAROTENE-3,3'-DIOL
lig 179	BCR	3	304	40	BETA-CAROTENE
lig 180	BCR	3	305	40	BETA-CAROTENE
lig 181	BCR	3	306	40	BETA-CAROTENE
lig 182	BCR	3	307	40	BETA-CAROTENE
lig 183	CLA	3	308	65	CHLOROPHYLL A
lig 184	CLA	3	309	46	CHLOROPHYLL A
lig 185	CLA	3	310	65	CHLOROPHYLL A
lig 186	CLA	3	311	60	CHLOROPHYLL A
lig 187	CLA	3	312	65	CHLOROPHYLL A
lig 188	CLA	3	313	65	CHLOROPHYLL A
lig 189	CLA	3	314	60	CHLOROPHYLL A
lig 190	CLA	3	315	45	CHLOROPHYLL A
lig 191	CLA	3	316	52	CHLOROPHYLL A
lig 192	CHL	3	317	66	CHLOROPHYLL B
lig 193	CLA	3	318	60	CHLOROPHYLL A
lig 194	CLA	3	319	55	CHLOROPHYLL A
lig 195	CLA	3	320	46	CHLOROPHYLL A
lig 196	LHG	3	321	20	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 197	CLA	3	322	65	CHLOROPHYLL A
lig 198	LUT	7	301	42	CAROTENE-3,3'-DIOL
lig 199	LUT	7	302	42	CAROTENE-3,3'-DIOL
lig 200	BCR	7	303	40	BETA-CAROTENE
lig 201	CLA	7	304	60	CHLOROPHYLL A
lig 202	CLA	7	305	50	CHLOROPHYLL A
lig 203	CLA	7	306	65	CHLOROPHYLL A
lig 204	CLA	7	307	65	CHLOROPHYLL A
lig 205	CLA	7	308	61	CHLOROPHYLL A
lig 206	CLA	7	309	56	CHLOROPHYLL A
lig 207	CLA	7	310	65	CHLOROPHYLL A
lig 208	CLA	7	311	43	CHLOROPHYLL A
lig 209	CLA	7	312	60	CHLOROPHYLL A
lig 210	CHL	7	313	54	CHLOROPHYLL B
lig 211	CLA	7	314	50	CHLOROPHYLL A
lig 212	CLA	7	315	50	CHLOROPHYLL A
lig 213	CLA	7	316	42	CHLOROPHYLL A
lig 214	CLA	7	317	58	CHLOROPHYLL A
lig 215	LHG	7	318	37	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 216	3PH	7	319	39	1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 217	SPH	7	320	21	SPHINGOSINE
lig 218	SPH	7	321	21	SPHINGOSINE
lig 219	CLA	7	322	55	CHLOROPHYLL A
lig 220	CLA	7	323	65	CHLOROPHYLL A
lig 221	CLA	7	324	60	CHLOROPHYLL A
lig 222	CHL	8	301	58	CHLOROPHYLL B
lig 223	LUT	8	302	42	CAROTENE-3,3'-DIOL
lig 224	LUT	8	303	42	CAROTENE-3,3'-DIOL
lig 225	BCR	8	304	40	BETA-CAROTENE
lig 226	CLA	8	305	60	CHLOROPHYLL A
lig 227	CLA	8	306	51	CHLOROPHYLL A
lig 228	CLA	8	307	65	CHLOROPHYLL A
lig 229	CLA	8	308	62	CHLOROPHYLL A
lig 230	CLA	8	309	65	CHLOROPHYLL A
lig 231	CLA	8	310	60	CHLOROPHYLL A
lig 232	CLA	8	311	50	CHLOROPHYLL A
lig 233	CHL	8	312	56	CHLOROPHYLL B
lig 234	CLA	8	313	50	CHLOROPHYLL A
lig 235	CLA	8	314	46	CHLOROPHYLL A
lig 236	CHL	8	315	66	CHLOROPHYLL B
lig 237	CLA	8	316	46	CHLOROPHYLL A
lig 238	LHG	8	317	38	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 239	NKP	8	318	29	ENOATE
lig 240	LPX	8	319	30	HYDROXYPROPYL HEXADECANOATE
lig 241	3PH	8	320	30	1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 242	LMT	4	801	35	DODECYL-BETA-D-MALTOSIDE
lig 243	LUT	4	802	42	CAROTENE-3,3'-DIOL
lig 244	LUT	4	803	42	CAROTENE-3,3'-DIOL
lig 245	BCR	4	804	40	BETA-CAROTENE
lig 246	CLA	4	805	60	CHLOROPHYLL A
lig 247	CLA	4	806	52	CHLOROPHYLL A
lig 248	CLA	4	807	65	CHLOROPHYLL A
lig 249	CLA	4	808	60	CHLOROPHYLL A
lig 250	CLA	4	809	51	CHLOROPHYLL A
lig 251	CLA	4	810	50	CHLOROPHYLL A
lig 252	CLA	4	811	55	CHLOROPHYLL A
lig 253	CLA	4	812	55	CHLOROPHYLL A
lig 254	CHL	4	813	51	CHLOROPHYLL B
lig 255	CHL	4	814	51	CHLOROPHYLL B
lig 256	CLA	4	815	50	CHLOROPHYLL A
lig 257	CHL	4	816	47	CHLOROPHYLL B
lig 258	CLA	4	817	41	CHLOROPHYLL A
lig 259	CLA	4	818	51	CHLOROPHYLL A
lig 260	CHL	4	819	43	CHLOROPHYLL B
lig 261	LHG	4	820	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 262	LHG	4	821	32	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 263	LMT	4	822	35	DODECYL-BETA-D-MALTOSIDE
lig 264	CLA	5	301	56	CHLOROPHYLL A
lig 265	LUT	5	302	42	CAROTENE-3,3'-DIOL
lig 266	LUT	5	303	42	CAROTENE-3,3'-DIOL
lig 267	BCR	5	304	40	BETA-CAROTENE
lig 268	BCR	5	305	40	BETA-CAROTENE
lig 269	C7Z	5	306	42	NONAENYL]CYCLOHEX-3-EN-1-OL
lig 270	CLA	5	307	60	CHLOROPHYLL A
lig 271	CLA	5	308	61	CHLOROPHYLL A
lig 272	CLA	5	309	56	CHLOROPHYLL A
lig 273	CLA	5	310	65	CHLOROPHYLL A
lig 274	CLA	5	311	55	CHLOROPHYLL A
lig 275	CLA	5	312	50	CHLOROPHYLL A
lig 276	CLA	5	313	61	CHLOROPHYLL A
lig 277	CLA	5	314	45	CHLOROPHYLL A
lig 278	CLA	5	315	65	CHLOROPHYLL A
lig 279	CHL	5	316	66	CHLOROPHYLL B
lig 280	CHL	5	317	51	CHLOROPHYLL B
lig 281	CLA	5	318	65	CHLOROPHYLL A
lig 282	CLA	5	319	55	CHLOROPHYLL A
lig 283	CLA	5	320	50	CHLOROPHYLL A
lig 284	CHL	5	321	43	CHLOROPHYLL B
lig 285	CLA	5	322	65	CHLOROPHYLL A
lig 286	CLA	5	323	46	CHLOROPHYLL A
lig 287	LHG	5	324	37	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 288	3PH	5	325	23	1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 289	CLA	5	326	55	CHLOROPHYLL A
lig 290	CLA	6	301	60	CHLOROPHYLL A
lig 291	CLA	6	302	60	CHLOROPHYLL A
lig 292	LUT	6	303	42	CAROTENE-3,3'-DIOL
lig 293	LUT	6	304	42	CAROTENE-3,3'-DIOL
lig 294	BCR	6	305	40	BETA-CAROTENE
lig 295	BCR	6	306	40	BETA-CAROTENE
lig 296	CLA	6	307	60	CHLOROPHYLL A
lig 297	CLA	6	308	52	CHLOROPHYLL A
lig 298	CLA	6	309	65	CHLOROPHYLL A
lig 299	CLA	6	310	65	CHLOROPHYLL A
lig 300	CLA	6	311	55	CHLOROPHYLL A
lig 301	CLA	6	312	65	CHLOROPHYLL A
lig 302	CLA	6	313	55	CHLOROPHYLL A
lig 303	CLA	6	314	65	CHLOROPHYLL A
lig 304	CHL	6	315	56	CHLOROPHYLL B
lig 305	CHL	6	316	51	CHLOROPHYLL B
lig 306	CLA	6	317	50	CHLOROPHYLL A
lig 307	CHL	6	318	56	CHLOROPHYLL B
lig 308	CLA	6	319	61	CHLOROPHYLL A
lig 309	CHL	6	320	43	CHLOROPHYLL B
lig 310	CLA	6	321	46	CHLOROPHYLL A
lig 311	CLA	6	322	65	CHLOROPHYLL A
lig 312	LHG	6	323	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 313	3PH	6	324	29	1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 314	LUT	9	301	42	CAROTENE-3,3'-DIOL
lig 315	LUT	9	302	42	CAROTENE-3,3'-DIOL
lig 316	CLA	9	303	60	CHLOROPHYLL A
lig 317	CLA	9	304	45	CHLOROPHYLL A
lig 318	CLA	9	305	60	CHLOROPHYLL A
lig 319	CLA	9	306	62	CHLOROPHYLL A
lig 320	CLA	9	307	55	CHLOROPHYLL A
lig 321	CLA	9	308	50	CHLOROPHYLL A
lig 322	CLA	9	309	55	CHLOROPHYLL A
lig 323	CLA	9	310	45	CHLOROPHYLL A
lig 324	CLA	9	311	46	CHLOROPHYLL A
lig 325	CHL	9	312	66	CHLOROPHYLL B
lig 326	CLA	9	313	50	CHLOROPHYLL A
lig 327	CHL	9	314	42	CHLOROPHYLL B
lig 328	LHG	9	315	33	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 329	CLA	2	301	55	CHLOROPHYLL A
lig 330	CLA	2	302	45	CHLOROPHYLL A
lig 331	CHL	2	303	51	CHLOROPHYLL B
lig 332	CLA	2	304	46	CHLOROPHYLL A

Analysis of Ligand-Protein Contacts in PDB entry: 8CMO

Analysis of Ligand-Protein Contacts in PDB entry:
8CMO