Analysis of Ligand-Protein Contacts in PDB entry:
8D2Y


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 8D2Y. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
LLP
A
80 24 YL]METHYLIDENEAMINO]HEXANOIC ACID
lig 2
DMS
A
501 4DIMETHYL SULFOXIDE
lig 3
EDO
A
502 41,2-ETHANEDIOL
lig 4
DMS
A
503 4DIMETHYL SULFOXIDE
lig 5
EPE
A
504 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 6
ACT
A
505 4ACETATE ION
lig 7
DMS
A
506 4DIMETHYL SULFOXIDE
lig 8
ACT
A
507 4ACETATE ION
lig 9
EDO
A
508 41,2-ETHANEDIOL
lig 10
GOL
A
509 6GLYCEROL
lig 11
GOL
A
510 6GLYCEROL
lig 12
CL
A
511 1CHLORIDE ION
lig 13
K
A
512 1POTASSIUM ION