Analysis of Ligand-Protein Contacts in PDB entry:
8D4T


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 8D4T. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
N
1 10N-FORMYLMETHIONINE
lig 2
FME
O
1 10N-FORMYLMETHIONINE
lig 3
CU
N
601 1COPPER (II) ION
lig 4
MG
N
602 1MAGNESIUM ION
lig 5
NA
N
603 1SODIUM ION
lig 6
HEA
N
604 60HEME-A
lig 7
HEA
N
605 60HEME-A
lig 8
PGV
N
606 51 OCTADEC-11-ENOATE
lig 9
CU
O
301 1COPPER (II) ION
lig 10
CU
O
302 1COPPER (II) ION
lig 11
PEK
P
301 53 11,14-TETRAENOATE
lig 12
PGV
P
302 51 OCTADEC-11-ENOATE
lig 13
9Z9
P
303 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 14
ZN
S
101 1ZINC ION