Analysis of Ligand-Protein Contacts in PDB entry:
8DN2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 43 ligands in PDB entry 8DN2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
HEX
D
502 6HEXANE
lig 3
HP6
D
503 7HEPTANE
lig 4
HEX
D
504 6HEXANE
lig 5
HEX
D
505 6HEXANE
lig 6
HP6
D
506 7HEPTANE
lig 7
UND
D
507 11UNDECANE
lig 8
HP6
D
508 7HEPTANE
lig 9
HP6
D
509 7HEPTANE
lig 10
OCT
D
510 8N-OCTANE
lig 11
GLY
A
501 5GLYCINE
lig 12
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
HEX
A
503 6HEXANE
lig 14
UND
A
504 11UNDECANE
lig 15
DD9
A
505 9NONANE
lig 16
NBU
A
506 4N-BUTANE
lig 17
OCT
A
507 8N-OCTANE
lig 18
OCT
A
508 8N-OCTANE
lig 19
HEX
A
509 6HEXANE
lig 20
HEX
A
510 6HEXANE
lig 21
HEX
B
501 6HEXANE
lig 22
GLY
B
502 5GLYCINE
lig 23
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
UND
B
504 11UNDECANE
lig 25
HP6
B
505 7HEPTANE
lig 26
HEX
B
506 6HEXANE
lig 27
GLY
C
501 5GLYCINE
lig 28
NAG
C
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
HP6
C
503 7HEPTANE
lig 30
OCT
C
504 8N-OCTANE
lig 31
HP6
C
505 7HEPTANE
lig 32
NBU
C
506 4N-BUTANE
lig 33
OCT
C
507 8N-OCTANE
lig 34
NBU
C
508 4N-BUTANE
lig 35
HEX
C
509 6HEXANE
lig 36
NAG
E
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
D10
E
502 10DECANE
lig 38
HEX
E
503 6HEXANE
lig 39
DD9
E
504 9NONANE
lig 40
OCT
E
505 8N-OCTANE
lig 41
HP6
E
506 7HEPTANE
lig 42
OCT
E
507 8N-OCTANE
lig 43
HP6
E
508 7HEPTANE