Analysis of Ligand-Protein Contacts in PDB entry:
8E7S


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 8E7S. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PEF
A
501 40DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 2
PEF
A
502 31DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 3
PEF
A
503 40DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 4
FES
C
301 4FE2/S2 (INORGANIC) CLUSTER
lig 5
CDL
C
302 53CARDIOLIPIN
lig 6
PEF
C
303 29DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 7
PEF
C
304 32DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 8
PCF
E
101 471,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 9
PEF
E
102 32DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 10
CDL
H
601 53CARDIOLIPIN
lig 11
PCF
H
602 501,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 12
PEF
J
401 45DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 13
CN5
J
402 41 PENTADECANOATE
lig 14
CDL
J
403 56CARDIOLIPIN
lig 15
HEM
J
404 43PROTOPORPHYRIN IX CONTAINING FE
lig 16
HEM
J
405 43PROTOPORPHYRIN IX CONTAINING FE
lig 17
UQ6
J
406 43 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZE
lig 18
PEF
J
407 43DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 19
UQ6
J
408 20 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZE
lig 20
PEF
J
409 29DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 21
HEA
K
601 60HEME-A
lig 22
CU
K
602 1COPPER (II) ION
lig 23
CDL
K
603 67CARDIOLIPIN
lig 24
HEA
K
604 60HEME-A
lig 25
HEM
L
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 26
CDL
L
402 67CARDIOLIPIN
lig 27
CUA
P
301 1DINUCLEAR COPPER ION
lig 28
CUA
P
302 1DINUCLEAR COPPER ION
lig 29
PEF
V
101 33DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 30
PEF
W
201 36DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 31
PEF
W
202 41DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 32
PCF
W
203 361,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 33
PEF
a
501 40DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 34
PCF
a
502 471,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 35
PEF
a
503 31DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 36
PEF
a
504 40DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 37
FES
c
301 4FE2/S2 (INORGANIC) CLUSTER
lig 38
CDL
c
302 48CARDIOLIPIN
lig 39
PEF
c
303 29DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 40
PEF
c
304 32DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 41
PEF
e
101 32DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 42
CDL
h
601 53CARDIOLIPIN
lig 43
CDL
h
602 67CARDIOLIPIN
lig 44
PEF
j
401 45DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 45
CDL
j
402 56CARDIOLIPIN
lig 46
HEM
j
403 43PROTOPORPHYRIN IX CONTAINING FE
lig 47
HEM
j
404 43PROTOPORPHYRIN IX CONTAINING FE
lig 48
UQ6
j
405 43 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZE
lig 49
PEF
j
406 43DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 50
UQ6
j
407 43 22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZE
lig 51
PEF
j
408 29DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 52
CU
k
601 1COPPER (II) ION
lig 53
CDL
k
602 67CARDIOLIPIN
lig 54
HEA
k
603 60HEME-A
lig 55
HEA
k
604 60HEME-A
lig 56
PCF
k
605 361,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 57
HEM
l
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 58
CUA
p
301 1DINUCLEAR COPPER ION
lig 59
CUA
p
302 1DINUCLEAR COPPER ION
lig 60
PEF
v
101 33DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 61
PEF
w
201 36DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 62
PEF
w
202 41DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 63
PCF
w
203 501,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE