Analysis of Ligand-Protein Contacts in PDB entry:
8GLF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 8GLF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 9
FUC
C
7 10ALPHA-L-FUCOPYRANOSE
lig 10
EDO
A
401 41,2-ETHANEDIOL
lig 11
EDO
A
402 41,2-ETHANEDIOL
lig 12
3LY
A
403 48 HYDROGEN PHOSPHATE
lig 13
6UL
A
404 26TETRACOSYL PALMITATE
lig 14
CL
A
405 1CHLORIDE ION
lig 15
CL
A
406 1CHLORIDE ION
lig 16
CL
A
407 1CHLORIDE ION
lig 17
CL
A
408 1CHLORIDE ION
lig 18
IOD
A
409 1IODIDE ION
lig 19
IOD
B
201 1IODIDE ION
lig 20
NI
B
202 1NICKEL (II) ION