Analysis of Ligand-Protein Contacts in PDB entry:
8GOC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 8GOC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
G
359 11PHOSPHOTHREONINE
lig 2
TPO
G
360 11PHOSPHOTHREONINE
lig 3
SEP
G
362 10PHOSPHOSERINE
lig 4
SEP
G
363 10PHOSPHOSERINE
lig 5
SEP
G
364 10PHOSPHOSERINE
lig 6
TPO
U
359 11PHOSPHOTHREONINE
lig 7
TPO
U
360 11PHOSPHOTHREONINE
lig 8
SEP
U
362 10PHOSPHOSERINE
lig 9
SEP
U
363 10PHOSPHOSERINE
lig 10
SEP
U
364 10PHOSPHOSERINE
lig 11
TPO
V
359 11PHOSPHOTHREONINE
lig 12
TPO
V
360 11PHOSPHOTHREONINE
lig 13
SEP
V
362 10PHOSPHOSERINE
lig 14
SEP
V
363 10PHOSPHOSERINE
lig 15
SEP
V
364 10PHOSPHOSERINE