Analysis of Ligand-Protein Contacts in PDB entry:
8GOO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 8GOO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
G
334 10PHOSPHOSERINE
lig 2
TPO
G
336 11PHOSPHOTHREONINE
lig 3
SEP
G
338 10PHOSPHOSERINE
lig 4
TPO
G
339 11PHOSPHOTHREONINE
lig 5
TPO
G
342 11PHOSPHOTHREONINE
lig 6
SEP
U
334 10PHOSPHOSERINE
lig 7
TPO
U
336 11PHOSPHOTHREONINE
lig 8
SEP
U
338 10PHOSPHOSERINE
lig 9
TPO
U
339 11PHOSPHOTHREONINE
lig 10
TPO
U
342 11PHOSPHOTHREONINE
lig 11
SEP
V
334 10PHOSPHOSERINE
lig 12
TPO
V
336 11PHOSPHOTHREONINE
lig 13
SEP
V
338 10PHOSPHOSERINE
lig 14
TPO
V
339 11PHOSPHOTHREONINE
lig 15
TPO
V
342 11PHOSPHOTHREONINE