Analysis of Ligand-Protein Contacts in PDB entry:
8GYY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 84 ligands in PDB entry 8GYY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
G
1 12ALPHA-D-MANNOPYRANOSE
lig 9
BMA
G
2 11BETA-D-MANNOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
AH2
J
3 111-DEOXY-ALPHA-D-MANNOPYRANOSE
lig 18
BMA
J
4 11BETA-D-MANNOPYRANOSE
lig 19
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
MAN
K
3 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
MAN
M
3 11ALPHA-D-MANNOPYRANOSE
lig 28
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
MAN
N
3 11ALPHA-D-MANNOPYRANOSE
lig 31
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BKR
B
901 59DEACETYLTAXOL
lig 36
XLS
B
902 9D-XYLOSE
lig 37
MAN
B
903 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
B
904 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
B
905 11ALPHA-D-MANNOPYRANOSE
lig 40
MAN
B
906 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
B
907 11ALPHA-D-MANNOPYRANOSE
lig 42
NAG
B
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
B
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
MAN
B
910 12ALPHA-D-MANNOPYRANOSE
lig 45
NAG
B
911 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
MAN
B
912 11ALPHA-D-MANNOPYRANOSE
lig 47
NAG
B
913 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
B
914 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
B
915 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
B
916 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
MAN
A
901 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
A
902 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
A
903 11ALPHA-D-MANNOPYRANOSE
lig 54
MAN
A
904 11ALPHA-D-MANNOPYRANOSE
lig 55
NAG
A
905 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
A
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
MAN
A
907 12ALPHA-D-MANNOPYRANOSE
lig 58
MAN
A
908 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
A
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
A
910 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
BKR
A
911 59DEACETYLTAXOL
lig 62
XLS
A
912 9D-XYLOSE
lig 63
NAG
C
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
C
902 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
MAN
C
903 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
C
904 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
C
905 11ALPHA-D-MANNOPYRANOSE
lig 68
MAN
C
906 11ALPHA-D-MANNOPYRANOSE
lig 69
MAN
C
907 11ALPHA-D-MANNOPYRANOSE
lig 70
NAG
C
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
C
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
C
910 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
C
911 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
BKR
C
912 59DEACETYLTAXOL
lig 75
BMA
D
901 11BETA-D-MANNOPYRANOSE
lig 76
MAN
D
902 11ALPHA-D-MANNOPYRANOSE
lig 77
MAN
D
903 11ALPHA-D-MANNOPYRANOSE
lig 78
MAN
D
904 11ALPHA-D-MANNOPYRANOSE
lig 79
MAN
D
905 11ALPHA-D-MANNOPYRANOSE
lig 80
NAG
D
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
NAG
D
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
NAG
D
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
D
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
BKR
D
910 59DEACETYLTAXOL