Analysis of Ligand-Protein Contacts in PDB entry:
8HG5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 65 ligands in PDB entry 8HG5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
Q
28 3ACETYL GROUP
lig 2
TPO
Q
31 11PHOSPHOTHREONINE
lig 3
CLA
P
301 65CHLOROPHYLL A
lig 4
CLA
P
302 65CHLOROPHYLL A
lig 5
CLA
P
303 50CHLOROPHYLL A
lig 6
CHL
P
304 46CHLOROPHYLL B
lig 7
CHL
P
305 46CHLOROPHYLL B
lig 8
CHL
P
306 52CHLOROPHYLL B
lig 9
CHL
P
307 44CHLOROPHYLL B
lig 10
KC2
P
308 45CHLOROPHYLL C2
lig 11
CLA
P
309 64CHLOROPHYLL A
lig 12
CLA
P
310 60CHLOROPHYLL A
lig 13
CLA
P
311 60CHLOROPHYLL A
lig 14
CLA
P
312 55CHLOROPHYLL A
lig 15
CLA
P
313 48CHLOROPHYLL A
lig 16
CHL
P
314 45CHLOROPHYLL B
lig 17
Q6L
P
315 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 18
Q6L
P
316 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 19
NEX
P
317 44 DIOL
lig 20
IWJ
P
318 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 21
Q6L
P
319 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 22
IWJ
P
320 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 23
Q6L
P
321 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 24
IWJ
Q
301 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 25
CLA
Q
302 65CHLOROPHYLL A
lig 26
CLA
Q
303 44CHLOROPHYLL A
lig 27
CLA
Q
304 50CHLOROPHYLL A
lig 28
CHL
Q
305 46CHLOROPHYLL B
lig 29
CHL
Q
306 50CHLOROPHYLL B
lig 30
CHL
Q
307 44CHLOROPHYLL B
lig 31
KC2
Q
308 45CHLOROPHYLL C2
lig 32
CLA
Q
309 55CHLOROPHYLL A
lig 33
CLA
Q
310 42CHLOROPHYLL A
lig 34
CLA
Q
311 46CHLOROPHYLL A
lig 35
CLA
Q
312 53CHLOROPHYLL A
lig 36
CLA
Q
313 48CHLOROPHYLL A
lig 37
CHL
Q
314 45CHLOROPHYLL B
lig 38
NEX
Q
315 44 DIOL
lig 39
Q6L
Q
316 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 40
Q6L
Q
317 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 41
Q6L
Q
318 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 42
IWJ
Q
319 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 43
Q6L
R
301 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 44
CHL
R
302 47CHLOROPHYLL B
lig 45
IWJ
R
303 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 46
Q6L
R
304 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 47
CLA
R
305 65CHLOROPHYLL A
lig 48
CLA
R
306 65CHLOROPHYLL A
lig 49
CLA
R
307 50CHLOROPHYLL A
lig 50
CHL
R
308 46CHLOROPHYLL B
lig 51
CHL
R
309 50CHLOROPHYLL B
lig 52
CHL
R
310 52CHLOROPHYLL B
lig 53
CHL
R
311 44CHLOROPHYLL B
lig 54
KC2
R
312 45CHLOROPHYLL C2
lig 55
CLA
R
313 64CHLOROPHYLL A
lig 56
CLA
R
314 60CHLOROPHYLL A
lig 57
CLA
R
315 60CHLOROPHYLL A
lig 58
CLA
R
316 55CHLOROPHYLL A
lig 59
CLA
R
317 48CHLOROPHYLL A
lig 60
CHL
R
318 45CHLOROPHYLL B
lig 61
Q6L
R
319 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 62
Q6L
R
320 42 OCTAENYL]CYCLOHEX-3-EN-1-OL
lig 63
NEX
R
321 44 DIOL
lig 64
IWJ
R
322 44 EN-1-YL]OCTADECA-3,5,7,9,11,13,15,17-OCTA
lig 65
Q6L
R
323 42 OCTAENYL]CYCLOHEX-3-EN-1-OL