Analysis of Ligand-Protein Contacts in PDB entry:
8IKV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 21 ligands in PDB entry 8IKV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
B
65 10PHOSPHOSERINE
lig 2
SEP
D
65 10PHOSPHOSERINE
lig 3
ZN
C
501 1ZINC ION
lig 4
ZN
C
502 1ZINC ION
lig 5
ZN
C
503 1ZINC ION
lig 6
ZN
C
504 1ZINC ION
lig 7
ZN
C
505 1ZINC ION
lig 8
ZN
C
506 1ZINC ION
lig 9
ZN
C
507 1ZINC ION
lig 10
ZN
C
508 1ZINC ION
lig 11
PEG
C
509 7DI(HYDROXYETHYL)ETHER
lig 12
PEG
C
510 7DI(HYDROXYETHYL)ETHER
lig 13
ZN
A
501 1ZINC ION
lig 14
ZN
A
502 1ZINC ION
lig 15
ZN
A
503 1ZINC ION
lig 16
ZN
A
504 1ZINC ION
lig 17
ZN
A
505 1ZINC ION
lig 18
ZN
A
506 1ZINC ION
lig 19
ZN
A
507 1ZINC ION
lig 20
ZN
A
508 1ZINC ION
lig 21
PEG
A
509 7DI(HYDROXYETHYL)ETHER