Analysis of Ligand-Protein Contacts in PDB entry:
8IMY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 8IMY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
AJP
G
1801 85DIGITONIN
lig 4
6OU
G
1802 45 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 5
6OU
G
1803 49 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 6
6OU
G
1804 39 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 7
Y01
G
1805 35CHOLESTEROL HEMISUCCINATE
lig 8
Y01
G
1806 35CHOLESTEROL HEMISUCCINATE
lig 9
Y01
G
1807 35CHOLESTEROL HEMISUCCINATE
lig 10
Y01
G
1808 35CHOLESTEROL HEMISUCCINATE
lig 11
Y01
G
1809 35CHOLESTEROL HEMISUCCINATE
lig 12
Y01
G
1810 35CHOLESTEROL HEMISUCCINATE
lig 13
Y01
G
1811 35CHOLESTEROL HEMISUCCINATE
lig 14
Y01
G
1812 35CHOLESTEROL HEMISUCCINATE
lig 15
MG
G
1813 1MAGNESIUM ION
lig 16
05E
G
1814 18 HYDROGEN PHOSPHATE
lig 17
80Y
G
1815 18 TETRAKIS(OXIDANYL)OXAN-2-YL]METHYL HYDROG
lig 18
CA
K
701 1CALCIUM ION
lig 19
6OU
U
801 40 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 20
Y01
U
802 35CHOLESTEROL HEMISUCCINATE
lig 21
Y01
U
803 35CHOLESTEROL HEMISUCCINATE
lig 22
Y01
U
804 35CHOLESTEROL HEMISUCCINATE
lig 23
Y01
U
805 35CHOLESTEROL HEMISUCCINATE
lig 24
Y01
U
806 35CHOLESTEROL HEMISUCCINATE
lig 25
Y01
U
807 35CHOLESTEROL HEMISUCCINATE
lig 26
Y01
U
808 35CHOLESTEROL HEMISUCCINATE
lig 27
Y01
U
809 35CHOLESTEROL HEMISUCCINATE
lig 28
6OU
U
810 49 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 29
LBN
U
811 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 30
NAG
T
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
81Q
T
902 77 14Z)-ICOSA-5,8,11,14-TETRAENOATE
lig 32
PA1
T
903 112-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 33
80T
S
901 88 PHOSPHORYL]OXY-PROPAN-2-YL] (Z)-OCTADEC-9
lig 34
NAG
S
902 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
6OU
S
903 40 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 36
Y01
S
904 35CHOLESTEROL HEMISUCCINATE
lig 37
Y01
S
905 35CHOLESTEROL HEMISUCCINATE
lig 38
Y01
D
301 35CHOLESTEROL HEMISUCCINATE
lig 39
80Y
D
302 18 TETRAKIS(OXIDANYL)OXAN-2-YL]METHYL HYDROG