Analysis of Ligand-Protein Contacts in PDB entry:
8JH6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 122 ligands in PDB entry 8JH6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DSN
A
1 6D-SERINE
lig 2
DVA
A
2 7D-VALINE
lig 3
DLY
A
3 9D-LYSINE
lig 4
DSN
A
4 6D-SERINE
lig 5
DGL
A
5 9D-GLUTAMIC ACID
lig 6
DTY
A
6 12D-TYROSINE
lig 7
DAL
A
7 5D-ALANINE
lig 8
DGL
A
8 9D-GLUTAMIC ACID
lig 9
DAL
A
9 5D-ALANINE
lig 10
DAL
A
10 5D-ALANINE
lig 11
DAL
A
11 5D-ALANINE
lig 12
DVA
A
12 7D-VALINE
lig 13
DGN
A
14 9D-GLUTAMINE
lig 14
DGL
A
15 9D-GLUTAMIC ACID
lig 15
DAL
A
16 5D-ALANINE
lig 16
DVA
A
17 7D-VALINE
lig 17
DAL
A
18 5D-ALANINE
lig 18
DVA
A
19 7D-VALINE
lig 19
DPN
A
20 11D-PHENYLALANINE
lig 20
DSG
A
21 8D-ASPARAGINE
lig 21
DTH
A
22 7D-THREONINE
lig 22
MED
A
23 8D-METHIONINE
lig 23
DLY
A
24 9D-LYSINE
lig 24
DAL
A
25 5D-ALANINE
lig 25
DAL
A
26 5D-ALANINE
lig 26
DPN
A
27 11D-PHENYLALANINE
lig 27
DGN
A
28 9D-GLUTAMINE
lig 28
DSG
A
29 8D-ASPARAGINE
lig 29
DAS
A
31 8D-ASPARTIC ACID
lig 30
DLY
A
32 9D-LYSINE
lig 31
DGL
A
33 9D-GLUTAMIC ACID
lig 32
DAL
A
34 5D-ALANINE
lig 33
DVA
A
35 7D-VALINE
lig 34
DAL
A
36 5D-ALANINE
lig 35
DGN
A
37 9D-GLUTAMINE
lig 36
DTY
A
38 12D-TYROSINE
lig 37
DLE
A
39 8D-LEUCINE
lig 38
DAL
A
40 5D-ALANINE
lig 39
DAR
A
41 11D-ARGININE
lig 40
DLE
A
42 8D-LEUCINE
lig 41
DAL
A
43 5D-ALANINE
lig 42
DSN
A
44 6D-SERINE
lig 43
DLE
A
45 8D-LEUCINE
lig 44
DTY
A
46 12D-TYROSINE
lig 45
DTH
A
47 7D-THREONINE
lig 46
DAR
A
48 11D-ARGININE
lig 47
DHI
A
49 10D-HISTIDINE
lig 48
DGL
A
50 9D-GLUTAMIC ACID
lig 49
DGL
A
51 9D-GLUTAMIC ACID
lig 50
DLE
A
52 8D-LEUCINE
lig 51
DLE
A
53 8D-LEUCINE
lig 52
DSG
A
54 8D-ASPARAGINE
lig 53
DAR
A
55 11D-ARGININE
lig 54
DIL
A
56 8D-ISOLEUCINE
lig 55
DLE
A
57 8D-LEUCINE
lig 56
DGL
A
58 9D-GLUTAMIC ACID
lig 57
DLY
A
59 9D-LYSINE
lig 58
DAL
A
60 5D-ALANINE
lig 59
DAR
A
61 11D-ARGININE
lig 60
DAR
A
62 11D-ARGININE
lig 61
DGL
A
63 9D-GLUTAMIC ACID
lig 62
DSG
A
65 8D-ASPARAGINE
lig 63
DLY
A
66 9D-LYSINE
lig 64
DGL
A
67 9D-GLUTAMIC ACID
lig 65
DAL
A
68 5D-ALANINE
lig 66
DVA
A
69 7D-VALINE
lig 67
DTH
A
70 7D-THREONINE
lig 68
DLE
A
71 8D-LEUCINE
lig 69
MED
A
72 8D-METHIONINE
lig 70
DSG
A
73 8D-ASPARAGINE
lig 71
DGL
A
74 9D-GLUTAMIC ACID
lig 72
DPN
A
75 11D-PHENYLALANINE
lig 73
DTH
A
76 7D-THREONINE
lig 74
DAL
A
77 5D-ALANINE
lig 75
DTH
A
78 7D-THREONINE
lig 76
DPN
A
79 11D-PHENYLALANINE
lig 77
DGN
A
80 9D-GLUTAMINE
lig 78
DTH
A
81 7D-THREONINE
lig 79
DLY
A
83 9D-LYSINE
lig 80
DSN
A
84 6D-SERINE
lig 81
DIL
A
85 8D-ISOLEUCINE
lig 82
DPN
A
86 11D-PHENYLALANINE
lig 83
DSG
A
87 8D-ASPARAGINE
lig 84
DAL
A
88 5D-ALANINE
lig 85
MED
A
89 8D-METHIONINE
lig 86
DVA
A
90 7D-VALINE
lig 87
DAL
A
91 5D-ALANINE
lig 88
DAL
A
92 5D-ALANINE
lig 89
DPN
A
93 11D-PHENYLALANINE
lig 90
DLY
A
94 9D-LYSINE
lig 91
DSG
A
95 8D-ASPARAGINE
lig 92
DAS
A
97 8D-ASPARTIC ACID
lig 93
DAS
A
98 8D-ASPARTIC ACID
lig 94
DAS
A
99 8D-ASPARTIC ACID
lig 95
DSN
A
100 6D-SERINE
lig 96
DPN
A
101 11D-PHENYLALANINE
lig 97
DGL
A
102 9D-GLUTAMIC ACID
lig 98
DSN
A
103 6D-SERINE
lig 99
DTY
A
104 12D-TYROSINE
lig 100
DLE
A
105 8D-LEUCINE
lig 101
DGN
A
106 9D-GLUTAMINE
lig 102
DAL
A
107 5D-ALANINE
lig 103
DLE
A
108 8D-LEUCINE
lig 104
DGL
A
109 9D-GLUTAMIC ACID
lig 105
DLY
A
110 9D-LYSINE
lig 106
DVA
A
111 7D-VALINE
lig 107
DTH
A
112 7D-THREONINE
lig 108
DAL
A
113 5D-ALANINE
lig 109
DLY
A
114 9D-LYSINE
lig 110
DGL
A
116 9D-GLUTAMIC ACID
lig 111
DTH
A
117 7D-THREONINE
lig 112
DLE
A
118 8D-LEUCINE
lig 113
DAL
A
119 5D-ALANINE
lig 114
DAS
A
120 8D-ASPARTIC ACID
lig 115
DGN
A
121 9D-GLUTAMINE
lig 116
DIL
A
122 8D-ISOLEUCINE
lig 117
DAL
A
123 5D-ALANINE
lig 118
DLY
A
124 9D-LYSINE
lig 119
DAL
A
125 5D-ALANINE
lig 120
DLE
A
126 9D-LEUCINE
lig 121
GG2
A
201 34 3-CARBOXAMIDE
lig 122
GG2
B
201 34 3-CARBOXAMIDE