Analysis of Ligand-Protein Contacts in PDB entry:
8Q1U


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 8Q1U. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
3PE
A
201 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
PC1
A
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PC1
A
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
SF4
B
201 8IRON/SULFUR CLUSTER
lig 20
PLC
B
202 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 21
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 22
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 23
SF4
F
502 8IRON/SULFUR CLUSTER
lig 24
SF4
G
801 8IRON/SULFUR CLUSTER
lig 25
SF4
G
802 8IRON/SULFUR CLUSTER
lig 26
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 27
K
G
804 1POTASSIUM ION
lig 28
U10
H
401 28UBIQUINONE-10
lig 29
PC1
H
402 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
PC1
H
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
SF4
I
201 8IRON/SULFUR CLUSTER
lig 32
SF4
I
202 8IRON/SULFUR CLUSTER
lig 33
3PE
I
203 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
PC1
I
204 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 35
PC1
I
205 371,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
CDL
J
201 36CARDIOLIPIN
lig 37
3PE
J
202 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
CDL
L
701 87CARDIOLIPIN
lig 40
3PE
L
702 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
3PE
L
703 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
L
704 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
3PE
L
705 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
PC1
L
706 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
PLC
L
707 27DIUNDECYL PHOSPHATIDYL CHOLINE
lig 46
ZN
M
601 1ZINC ION
lig 47
CDL
M
602 91CARDIOLIPIN
lig 48
3PE
M
603 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
PC1
M
604 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
PC1
M
605 261,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 51
CDL
N
401 74CARDIOLIPIN
lig 52
3PE
N
402 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
3PE
N
403 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
3PE
N
404 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 55
PLC
N
405 26DIUNDECYL PHOSPHATIDYL CHOLINE
lig 56
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 57
MG
O
402 1MAGNESIUM ION
lig 58
NDP
P
501 48 PHOSPHATE
lig 59
PC1
P
502 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
ZN
R
201 1ZINC ION
lig 61
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 62
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 63
CDL
X
201 87CARDIOLIPIN
lig 64
3PE
Y
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
3PE
Y
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 66
3PE
Y
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
Y
204 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
PC1
Y
205 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 69
3PE
Z
201 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 70
3PE
b
101 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 71
PLC
b
102 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 72
CDL
d
201 65CARDIOLIPIN
lig 73
3PE
d
202 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 74
PC1
d
203 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 75
3PE
g
201 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 76
PLC
g
202 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 77
CDL
h
201 80CARDIOLIPIN
lig 78
PC1
h
202 311,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 79
CHD
i
201 29CHOLIC ACID
lig 80
3PE
i
202 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 81
3PE
m
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 82
3PE
m
202 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 83
MYR
o
201 15MYRISTIC ACID
lig 84
3PE
o
202 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 85
CDL
q
201 61CARDIOLIPIN
lig 86
PC1
q
202 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 87
PC1
q
203 301,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE