Analysis of Ligand-Protein Contacts in PDB entry:
8QDE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 8QDE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAI
A
401 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 2
OXM
A
402 6OXAMIC ACID
lig 3
PGE
A
403 10TRIETHYLENE GLYCOL
lig 4
SO4
A
404 5SULFATE ION
lig 5
SO4
A
405 5SULFATE ION
lig 6
SO4
A
406 5SULFATE ION
lig 7
NAI
B
401 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 8
OXM
B
402 6OXAMIC ACID
lig 9
PEG
B
403 7DI(HYDROXYETHYL)ETHER
lig 10
PGE
B
404 10TRIETHYLENE GLYCOL
lig 11
SO4
B
405 5SULFATE ION
lig 12
NAI
C
401 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 13
OXM
C
402 6OXAMIC ACID
lig 14
PGE
C
403 10TRIETHYLENE GLYCOL
lig 15
SO4
C
404 5SULFATE ION
lig 16
SO4
C
405 5SULFATE ION
lig 17
NAI
D
401 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 18
OXM
D
402 6OXAMIC ACID
lig 19
SO4
D
403 5SULFATE ION