Analysis of Ligand-Protein Contacts in PDB entry:
8QKP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 224 ligands in PDB entry 8QKP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
3001 1CALCIUM ION
lig 2
CA
B
3001 1CALCIUM ION
lig 3
CA
C
2201 1CALCIUM ION
lig 4
CA
C
2202 1CALCIUM ION
lig 5
SRA
C
2203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 6
SSU
C
2204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 7
G
C
2205 23GUANOSINE-5'-MONOPHOSPHATE
lig 8
C
C
2206 20CYTIDINE-5'-MONOPHOSPHATE
lig 9
CA
D
3001 1CALCIUM ION
lig 10
CA
E
3001 1CALCIUM ION
lig 11
C
E
3002 20CYTIDINE-5'-MONOPHOSPHATE
lig 12
SRA
E
3003 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 13
CA
E
3004 1CALCIUM ION
lig 14
CA
F
201 1CALCIUM ION
lig 15
SRA
F
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 16
SRA
F
203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 17
SSU
F
204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 18
CA
F
205 1CALCIUM ION
lig 19
CA
F
206 1CALCIUM ION
lig 20
CA
G
3001 1CALCIUM ION
lig 21
CA
G
3002 1CALCIUM ION
lig 22
G
H
2201 23GUANOSINE-5'-MONOPHOSPHATE
lig 23
C
H
2202 20CYTIDINE-5'-MONOPHOSPHATE
lig 24
SRA
H
2203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 25
SRA
H
2204 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 26
CA
H
2205 1CALCIUM ION
lig 27
CA
H
2206 1CALCIUM ION
lig 28
SSU
H
2207 20URIDINE-5'-PHOSPHOROTHIOATE
lig 29
SRA
H
2208 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 30
SSU
H
2209 20URIDINE-5'-PHOSPHOROTHIOATE
lig 31
CA
I
3001 1CALCIUM ION
lig 32
C
I
3002 20CYTIDINE-5'-MONOPHOSPHATE
lig 33
SRA
I
3003 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 34
SSU
I
3004 20URIDINE-5'-PHOSPHOROTHIOATE
lig 35
G
I
3005 23GUANOSINE-5'-MONOPHOSPHATE
lig 36
G
I
3006 23GUANOSINE-5'-MONOPHOSPHATE
lig 37
C
I
3007 20CYTIDINE-5'-MONOPHOSPHATE
lig 38
SRA
I
3008 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 39
CA
J
3001 1CALCIUM ION
lig 40
SRA
J
3002 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 41
SSU
J
3003 20URIDINE-5'-PHOSPHOROTHIOATE
lig 42
SSU
K
2201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 43
SSU
K
2202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 44
SRA
K
2203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 45
SSU
K
2204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 46
G
K
2205 23GUANOSINE-5'-MONOPHOSPHATE
lig 47
CA
K
2206 1CALCIUM ION
lig 48
SRA
L
2201 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 49
SSU
L
2202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 50
CA
L
2203 1CALCIUM ION
lig 51
C
L
2204 20CYTIDINE-5'-MONOPHOSPHATE
lig 52
SRA
L
2205 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 53
SRA
L
2206 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 54
SSU
L
2207 20URIDINE-5'-PHOSPHOROTHIOATE
lig 55
CA
L
2208 1CALCIUM ION
lig 56
CA
M
3000 1CALCIUM ION
lig 57
CA
M
3001 1CALCIUM ION
lig 58
C
N
2201 20CYTIDINE-5'-MONOPHOSPHATE
lig 59
SRA
N
2202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 60
CA
N
2203 1CALCIUM ION
lig 61
CA
N
2204 1CALCIUM ION
lig 62
CA
O
3001 1CALCIUM ION
lig 63
CA
O
3002 1CALCIUM ION
lig 64
SSU
P
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 65
SRA
P
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 66
SSU
P
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 67
G
P
204 23GUANOSINE-5'-MONOPHOSPHATE
lig 68
CA
P
205 1CALCIUM ION
lig 69
CA
Q
3001 1CALCIUM ION
lig 70
SRA
Q
3002 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 71
SSU
Q
3003 20URIDINE-5'-PHOSPHOROTHIOATE
lig 72
G
Q
3004 23GUANOSINE-5'-MONOPHOSPHATE
lig 73
G
R
2201 23GUANOSINE-5'-MONOPHOSPHATE
lig 74
SRA
R
2202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 75
SRA
R
2203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 76
SSU
R
2204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 77
CA
R
2205 1CALCIUM ION
lig 78
CA
R
2206 1CALCIUM ION
lig 79
CA
S
3001 1CALCIUM ION
lig 80
CA
S
3002 1CALCIUM ION
lig 81
SRA
T
1001 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 82
SSU
T
1002 20URIDINE-5'-PHOSPHOROTHIOATE
lig 83
G
T
1003 23GUANOSINE-5'-MONOPHOSPHATE
lig 84
CA
T
1004 1CALCIUM ION
lig 85
CA
U
201 1CALCIUM ION
lig 86
CA
U
202 1CALCIUM ION
lig 87
CA
V
201 1CALCIUM ION
lig 88
CA
V
202 1CALCIUM ION
lig 89
G
W
2001 23GUANOSINE-5'-MONOPHOSPHATE
lig 90
C
W
2002 20CYTIDINE-5'-MONOPHOSPHATE
lig 91
SRA
W
2003 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 92
CA
W
2004 1CALCIUM ION
lig 93
CA
W
2005 1CALCIUM ION
lig 94
SSU
X
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 95
SSU
X
202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 96
CA
X
203 1CALCIUM ION
lig 97
CA
X
204 1CALCIUM ION
lig 98
G
Y
2001 23GUANOSINE-5'-MONOPHOSPHATE
lig 99
C
Y
2002 20CYTIDINE-5'-MONOPHOSPHATE
lig 100
SRA
Y
2003 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 101
SRA
Y
2004 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 102
CA
Y
2005 1CALCIUM ION
lig 103
CA
Z
201 1CALCIUM ION
lig 104
SSU
a
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 105
SRA
a
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 106
SSU
a
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 107
G
a
204 23GUANOSINE-5'-MONOPHOSPHATE
lig 108
CA
a
205 1CALCIUM ION
lig 109
G
b
201 23GUANOSINE-5'-MONOPHOSPHATE
lig 110
C
b
202 20CYTIDINE-5'-MONOPHOSPHATE
lig 111
SRA
b
203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 112
SSU
b
204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 113
SRA
b
205 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 114
SSU
b
206 20URIDINE-5'-PHOSPHOROTHIOATE
lig 115
G
b
207 23GUANOSINE-5'-MONOPHOSPHATE
lig 116
C
b
208 20CYTIDINE-5'-MONOPHOSPHATE
lig 117
SRA
b
209 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 118
CA
b
210 1CALCIUM ION
lig 119
CA
c
201 1CALCIUM ION
lig 120
CA
d
201 1CALCIUM ION
lig 121
SSU
e
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 122
G
e
202 23GUANOSINE-5'-MONOPHOSPHATE
lig 123
C
e
203 20CYTIDINE-5'-MONOPHOSPHATE
lig 124
SRA
e
204 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 125
CA
e
205 1CALCIUM ION
lig 126
CA
f
201 1CALCIUM ION
lig 127
C
g
201 20CYTIDINE-5'-MONOPHOSPHATE
lig 128
SRA
g
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 129
SSU
g
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 130
G
g
204 23GUANOSINE-5'-MONOPHOSPHATE
lig 131
C
g
205 20CYTIDINE-5'-MONOPHOSPHATE
lig 132
SRA
g
206 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 133
SSU
g
207 20URIDINE-5'-PHOSPHOROTHIOATE
lig 134
CA
g
208 1CALCIUM ION
lig 135
SRA
h
201 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 136
SSU
h
202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 137
CA
h
203 1CALCIUM ION
lig 138
SSU
i
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 139
SRA
i
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 140
SSU
i
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 141
G
i
204 23GUANOSINE-5'-MONOPHOSPHATE
lig 142
C
i
205 20CYTIDINE-5'-MONOPHOSPHATE
lig 143
CA
i
206 1CALCIUM ION
lig 144
CA
j
201 1CALCIUM ION
lig 145
G
k
2001 23GUANOSINE-5'-MONOPHOSPHATE
lig 146
C
k
2002 20CYTIDINE-5'-MONOPHOSPHATE
lig 147
SRA
k
2003 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 148
SRA
k
2004 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 149
CA
k
2005 1CALCIUM ION
lig 150
CA
l
201 1CALCIUM ION
lig 151
CA
m
201 1CALCIUM ION
lig 152
CA
n
201 1CALCIUM ION
lig 153
CA
o
201 1CALCIUM ION
lig 154
CA
p
201 1CALCIUM ION
lig 155
SSU
q
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 156
G
q
202 23GUANOSINE-5'-MONOPHOSPHATE
lig 157
C
q
203 20CYTIDINE-5'-MONOPHOSPHATE
lig 158
SRA
q
204 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 159
SRA
q
205 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 160
CA
q
206 1CALCIUM ION
lig 161
G
r
2001 23GUANOSINE-5'-MONOPHOSPHATE
lig 162
C
r
2002 20CYTIDINE-5'-MONOPHOSPHATE
lig 163
C
r
2003 20CYTIDINE-5'-MONOPHOSPHATE
lig 164
SRA
r
2004 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 165
SSU
r
2005 20URIDINE-5'-PHOSPHOROTHIOATE
lig 166
CA
r
2006 1CALCIUM ION
lig 167
CA
s
201 1CALCIUM ION
lig 168
SSU
t
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 169
SSU
t
202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 170
SRA
t
203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 171
SSU
t
204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 172
SRA
t
205 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 173
SSU
t
206 20URIDINE-5'-PHOSPHOROTHIOATE
lig 174
CA
t
207 1CALCIUM ION
lig 175
CA
u
201 1CALCIUM ION
lig 176
SSU
v
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 177
CA
v
202 1CALCIUM ION
lig 178
SSU
w
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 179
SRA
w
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 180
SSU
w
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 181
CA
w
204 1CALCIUM ION
lig 182
SRA
x
201 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 183
CA
x
202 1CALCIUM ION
lig 184
C
y
201 20CYTIDINE-5'-MONOPHOSPHATE
lig 185
SRA
y
202 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 186
SSU
y
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 187
G
y
204 23GUANOSINE-5'-MONOPHOSPHATE
lig 188
CA
y
205 1CALCIUM ION
lig 189
SSU
z
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 190
C
z
202 20CYTIDINE-5'-MONOPHOSPHATE
lig 191
SRA
z
203 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 192
SSU
z
204 20URIDINE-5'-PHOSPHOROTHIOATE
lig 193
CA
z
205 1CALCIUM ION
lig 194
CA
0
201 1CALCIUM ION
lig 195
CA
0
202 1CALCIUM ION
lig 196
CA
0
203 1CALCIUM ION
lig 197
CA
1
201 1CALCIUM ION
lig 198
CA
1
202 1CALCIUM ION
lig 199
CA
1
203 1CALCIUM ION
lig 200
SSU
2
201 20URIDINE-5'-PHOSPHOROTHIOATE
lig 201
C
2
202 20CYTIDINE-5'-MONOPHOSPHATE
lig 202
CA
2
203 1CALCIUM ION
lig 203
CA
2
204 1CALCIUM ION
lig 204
CA
2
205 1CALCIUM ION
lig 205
CA
3
201 1CALCIUM ION
lig 206
SSU
3
202 20URIDINE-5'-PHOSPHOROTHIOATE
lig 207
SSU
3
203 20URIDINE-5'-PHOSPHOROTHIOATE
lig 208
CA
3
204 1CALCIUM ION
lig 209
CA
3
205 1CALCIUM ION
lig 210
SRA
4
1001 22ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 211
SSU
4
1002 20URIDINE-5'-PHOSPHOROTHIOATE
lig 212
G
4
1003 23GUANOSINE-5'-MONOPHOSPHATE
lig 213
CA
4
1004 1CALCIUM ION
lig 214
CA
4
1005 1CALCIUM ION
lig 215
CA
4
1006 1CALCIUM ION
lig 216
CA
5
201 1CALCIUM ION
lig 217
CA
5
202 1CALCIUM ION
lig 218
CA
5
203 1CALCIUM ION
lig 219
CA
6
201 1CALCIUM ION
lig 220
CA
6
202 1CALCIUM ION
lig 221
CA
6
203 1CALCIUM ION
lig 222
CA
7
201 1CALCIUM ION
lig 223
CA
7
202 1CALCIUM ION
lig 224
CA
7
203 1CALCIUM ION