Analysis of Ligand-Protein Contacts in PDB entry:
8RD3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 8RD3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CME
B
27 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
EDO
A
901 41,2-ETHANEDIOL
lig 3
SIN
A
902 8SUCCINIC ACID
lig 4
EDO
A
903 41,2-ETHANEDIOL
lig 5
EDO
A
904 41,2-ETHANEDIOL
lig 6
EDO
A
905 41,2-ETHANEDIOL
lig 7
EDO
A
906 41,2-ETHANEDIOL
lig 8
FMT
A
907 3FORMIC ACID
lig 9
EDO
A
908 41,2-ETHANEDIOL
lig 10
EDO
A
909 41,2-ETHANEDIOL
lig 11
MLA
A
910 7MALONIC ACID
lig 12
EDO
A
911 41,2-ETHANEDIOL
lig 13
EDO
B
301 41,2-ETHANEDIOL