Analysis of Ligand-Protein Contacts in PDB entry:
8RDE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 8RDE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
5601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
CA
A
5602 1CALCIUM ION
lig 3
NAG
A
5603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
CA
A
5604 1CALCIUM ION
lig 5
CA
A
5605 1CALCIUM ION
lig 6
CA
A
5606 1CALCIUM ION
lig 7
NAG
A
5607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
5608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
5609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
5610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
D
5601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CA
D
5602 1CALCIUM ION
lig 13
NAG
D
5603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
CA
D
5604 1CALCIUM ION
lig 15
CA
D
5605 1CALCIUM ION
lig 16
CA
D
5606 1CALCIUM ION
lig 17
NAG
D
5607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
D
5608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
D
5609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
D
5610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE