Analysis of Ligand-Protein Contacts in PDB entry:
8RQ5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 85 ligands in PDB entry 8RQ5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OLC
A
301 7(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 2
LFA
A
302 20EICOSANE
lig 3
RET
A
303 20RETINAL
lig 4
NA
A
304 1SODIUM ION
lig 5
OLA
A
305 20OLEIC ACID
lig 6
LFA
A
306 14EICOSANE
lig 7
LFA
A
307 7EICOSANE
lig 8
LFA
A
308 11EICOSANE
lig 9
LFA
A
309 8EICOSANE
lig 10
LFA
A
310 9EICOSANE
lig 11
LFA
A
311 17EICOSANE
lig 12
LFA
A
312 9EICOSANE
lig 13
LFA
A
313 10EICOSANE
lig 14
LFA
A
314 8EICOSANE
lig 15
LFA
A
315 11EICOSANE
lig 16
LFA
A
316 9EICOSANE
lig 17
OLA
B
301 20OLEIC ACID
lig 18
LFA
B
302 20EICOSANE
lig 19
OLC
B
303 7(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 20
RET
B
304 20RETINAL
lig 21
LFA
B
305 4EICOSANE
lig 22
NA
B
306 1SODIUM ION
lig 23
LFA
B
307 11EICOSANE
lig 24
LFA
B
308 8EICOSANE
lig 25
LFA
B
309 8EICOSANE
lig 26
LFA
B
310 11EICOSANE
lig 27
LFA
B
311 11EICOSANE
lig 28
LFA
B
312 11EICOSANE
lig 29
LFA
B
313 7EICOSANE
lig 30
LFA
B
314 9EICOSANE
lig 31
LFA
B
315 13EICOSANE
lig 32
LFA
B
316 8EICOSANE
lig 33
LFA
B
317 16EICOSANE
lig 34
OLC
C
301 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 35
LFA
C
302 20EICOSANE
lig 36
RET
C
303 20RETINAL
lig 37
NA
C
304 1SODIUM ION
lig 38
LFA
C
305 15EICOSANE
lig 39
OLC
C
306 23(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 40
LFA
C
307 8EICOSANE
lig 41
LFA
C
308 9EICOSANE
lig 42
LFA
C
309 11EICOSANE
lig 43
LFA
C
310 7EICOSANE
lig 44
LFA
C
311 10EICOSANE
lig 45
LFA
C
312 10EICOSANE
lig 46
LFA
C
313 11EICOSANE
lig 47
LFA
C
314 20EICOSANE
lig 48
LFA
C
315 15EICOSANE
lig 49
LFA
C
316 7EICOSANE
lig 50
LFA
C
317 15EICOSANE
lig 51
LFA
C
318 11EICOSANE
lig 52
OLA
D
301 20OLEIC ACID
lig 53
LFA
D
302 20EICOSANE
lig 54
OLC
D
303 7(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 55
RET
D
304 20RETINAL
lig 56
NA
D
305 1SODIUM ION
lig 57
LFA
D
306 18EICOSANE
lig 58
LFA
D
307 14EICOSANE
lig 59
LFA
D
308 11EICOSANE
lig 60
LFA
D
309 8EICOSANE
lig 61
LFA
D
310 8EICOSANE
lig 62
LFA
D
311 10EICOSANE
lig 63
LFA
D
312 7EICOSANE
lig 64
LFA
D
313 10EICOSANE
lig 65
LFA
D
314 14EICOSANE
lig 66
LFA
D
315 8EICOSANE
lig 67
LFA
D
316 14EICOSANE
lig 68
LFA
D
317 9EICOSANE
lig 69
LFA
D
318 8EICOSANE
lig 70
LFA
E
301 11EICOSANE
lig 71
LFA
E
302 11EICOSANE
lig 72
LFA
E
303 19EICOSANE
lig 73
LFA
E
304 20EICOSANE
lig 74
RET
E
305 20RETINAL
lig 75
NA
E
306 1SODIUM ION
lig 76
LFA
E
307 12EICOSANE
lig 77
LFA
E
308 7EICOSANE
lig 78
OLA
E
309 20OLEIC ACID
lig 79
LFA
E
310 14EICOSANE
lig 80
LFA
E
311 7EICOSANE
lig 81
LFA
E
312 17EICOSANE
lig 82
LFA
E
313 8EICOSANE
lig 83
LFA
E
314 12EICOSANE
lig 84
LFA
E
315 8EICOSANE
lig 85
LFA
E
316 10EICOSANE