Analysis of Ligand-Protein Contacts in PDB entry:
8S09


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 8S09. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ATP
2
1001 31ADENOSINE-5'-TRIPHOSPHATE
lig 2
MG
2
1002 1MAGNESIUM ION
lig 3
ZN
2
1003 1ZINC ION
lig 4
ADP
3
901 27ADENOSINE-5'-DIPHOSPHATE
lig 5
MG
3
902 1MAGNESIUM ION
lig 6
ZN
4
901 1ZINC ION
lig 7
ADP
4
902 27ADENOSINE-5'-DIPHOSPHATE
lig 8
ADP
5
801 27ADENOSINE-5'-DIPHOSPHATE
lig 9
ZN
5
802 1ZINC ION
lig 10
MG
6
901 1MAGNESIUM ION
lig 11
ZN
6
902 1ZINC ION
lig 12
ADP
7
801 27ADENOSINE-5'-DIPHOSPHATE
lig 13
MG
7
802 1MAGNESIUM ION
lig 14
ZN
7
803 1ZINC ION
lig 15
ATP
A
1001 31ADENOSINE-5'-TRIPHOSPHATE
lig 16
MG
A
1002 1MAGNESIUM ION
lig 17
ZN
A
1003 1ZINC ION
lig 18
ADP
B
901 27ADENOSINE-5'-DIPHOSPHATE
lig 19
MG
B
902 1MAGNESIUM ION
lig 20
ZN
C
901 1ZINC ION
lig 21
ADP
C
902 27ADENOSINE-5'-DIPHOSPHATE
lig 22
ADP
D
801 27ADENOSINE-5'-DIPHOSPHATE
lig 23
ZN
D
802 1ZINC ION
lig 24
MG
E
901 1MAGNESIUM ION
lig 25
ZN
E
902 1ZINC ION
lig 26
ADP
F
801 27ADENOSINE-5'-DIPHOSPHATE
lig 27
MG
F
802 1MAGNESIUM ION
lig 28
ZN
F
803 1ZINC ION