Analysis of Ligand-Protein Contacts in PDB entry:
8SS7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 8SS7. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
6ZP
A
1101 27 YL)BENZONITRILE
lig 2
ZK1
A
1102 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 3
PCW
A
1103 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 4
PCW
A
1104 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 5
PCW
A
1105 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 6
PCW
A
1106 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 7
CLR
A
1107 28CHOLESTEROL
lig 8
CLR
A
1108 28CHOLESTEROL
lig 9
PCW
A
1109 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PCW
A
1110 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
NA
A
1111 1SODIUM ION
lig 12
SPD
A
1112 10SPERMIDINE
lig 13
6ZP
B
1101 27 YL)BENZONITRILE
lig 14
ZK1
B
1102 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 15
PCW
B
1103 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
PCW
B
1104 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
PCW
B
1105 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PCW
B
1106 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
CLR
B
1107 28CHOLESTEROL
lig 20
CLR
B
1108 28CHOLESTEROL
lig 21
PCW
B
1109 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
6ZP
C
1101 27 YL)BENZONITRILE
lig 23
ZK1
C
1102 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 24
PCW
C
1103 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
PCW
C
1104 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
PCW
C
1105 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
PCW
C
1106 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
CLR
C
1107 28CHOLESTEROL
lig 29
CLR
C
1108 28CHOLESTEROL
lig 30
PCW
C
1109 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
PCW
C
1110 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PCW
D
1101 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
6ZP
D
1102 27 YL)BENZONITRILE
lig 34
ZK1
D
1103 27 DIHYDROQUINOXALIN-1(2H)-YL]METHYL}PHOSPHO
lig 35
PCW
D
1104 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
PCW
D
1105 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
PCW
D
1106 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 38
PCW
D
1107 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 39
CLR
D
1108 28CHOLESTEROL
lig 40
CLR
D
1109 28CHOLESTEROL
lig 41
PCW
E
201 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
PCW
E
202 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 43
PCW
E
203 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PCW
F
201 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
PCW
F
202 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 46
PCW
F
203 111,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE