Analysis of Ligand-Protein Contacts in PDB entry:
8SV9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 13 ligands in PDB entry 8SV9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
87 10PHOSPHOSERINE
lig 2
TPO
A
180 11PHOSPHOTHREONINE
lig 3
SEP
B
87 10PHOSPHOSERINE
lig 4
TPO
B
180 11PHOSPHOTHREONINE
lig 5
WXH
A
301 28 THIOPHENE-2-CARBOXAMIDE
lig 6
SO4
A
302 5SULFATE ION
lig 7
SO4
A
303 5SULFATE ION
lig 8
SO4
A
304 5SULFATE ION
lig 9
WXH
B
301 28 THIOPHENE-2-CARBOXAMIDE
lig 10
SO4
B
302 5SULFATE ION
lig 11
SO4
B
303 5SULFATE ION
lig 12
SO4
B
304 5SULFATE ION
lig 13
EDO
B
305 41,2-ETHANEDIOL