Analysis of Ligand-Protein Contacts in PDB entry:
8SWB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 8SWB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OMC
D
1 18O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 2
N7X
D
2 25 2'-O-(2-METHOXYETHYL)-5-METHYLCYTIDINE
lig 3
T39
D
3 252'-O-METHOXYETHYLENE THYMIDINE 5'-MONOPHOS
lig 4
C5L
D
4 25 PHOSPHATE)
lig 5
A2M
D
5 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 6
SC
D
6 192-DEOXY-CYTIDINE-5'-THIOPHOSPHORATE
lig 7
PST
D
7 20THYMIDINE-5'-THIOPHOSPHATE
lig 8
SC
D
8 192-DEOXY-CYTIDINE-5'-THIOPHOSPHORATE
lig 9
SC
D
10 192-DEOXY-CYTIDINE-5'-THIOPHOSPHORATE
lig 10
SC
D
11 192-DEOXY-CYTIDINE-5'-THIOPHOSPHORATE
lig 11
C7R
D
12 192'-DEOXY-5'-O-THIOPHOSPHONOCYTIDINE
lig 12
AS
D
13 212-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE
lig 13
SC
D
14 192-DEOXY-CYTIDINE-5'-THIOPHOSPHORATE
lig 14
PST
D
15 20THYMIDINE-5'-THIOPHOSPHATE
lig 15
OKQ
D
16 212'-O-METHYLCYTIDINE-5'-PHOSPHOROTHIOATE
lig 16
RFJ
D
17 242'-O-METHYL-5'-O-THIOPHOSPHONOGUANOSINE
lig 17
OKQ
D
18 212'-O-METHYLCYTIDINE-5'-PHOSPHOROTHIOATE
lig 18
OKQ
D
19 212'-O-METHYLCYTIDINE-5'-PHOSPHOROTHIOATE
lig 19
6NW
D
20 232'-O-METHYL-5'-O-THIOPHOSPHONOADENOSINE
lig 20
GOL
A
301 6GLYCEROL
lig 21
PO4
A
302 5PHOSPHATE ION
lig 22
PEG
D
201 7DI(HYDROXYETHYL)ETHER