Analysis of Ligand-Protein Contacts in PDB entry:
8V07


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 8V07. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
CIT
B
501 13CITRIC ACID
lig 28
GOL
B
502 6GLYCEROL
lig 29
ACE
B
503 3ACETYL GROUP
lig 30
GOL
B
504 6GLYCEROL
lig 31
PO4
B
505 5PHOSPHATE ION
lig 32
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
GOL
A
502 6GLYCEROL
lig 34
PO4
A
503 5PHOSPHATE ION
lig 35
GOL
C
501 6GLYCEROL
lig 36
PO4
C
502 5PHOSPHATE ION
lig 37
GOL
D
501 6GLYCEROL
lig 38
GOL
D
502 6GLYCEROL
lig 39
PO4
D
503 5PHOSPHATE ION