Analysis of Ligand-Protein Contacts in PDB entry:
8V2F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 25 ligands in PDB entry 8V2F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
342 11PHOSPHOTHREONINE
lig 2
TPO
A
345 11PHOSPHOTHREONINE
lig 3
SEP
A
346 10PHOSPHOSERINE
lig 4
TPO
B
342 11PHOSPHOTHREONINE
lig 5
TPO
B
345 11PHOSPHOTHREONINE
lig 6
SEP
B
346 10PHOSPHOSERINE
lig 7
TPO
C
342 11PHOSPHOTHREONINE
lig 8
TPO
C
345 11PHOSPHOTHREONINE
lig 9
SEP
C
346 10PHOSPHOSERINE
lig 10
TPO
D
342 11PHOSPHOTHREONINE
lig 11
TPO
D
345 11PHOSPHOTHREONINE
lig 12
SEP
D
346 10PHOSPHOSERINE
lig 13
YJU
A
501 34 (TRIFLUOROMETHYL)PYRIDINE-2-CARBOXAMIDE
lig 14
CL
A
502 1CHLORIDE ION
lig 15
GOL
A
503 6GLYCEROL
lig 16
GOL
A
504 6GLYCEROL
lig 17
YJU
B
501 34 (TRIFLUOROMETHYL)PYRIDINE-2-CARBOXAMIDE
lig 18
CL
B
502 1CHLORIDE ION
lig 19
GOL
B
503 6GLYCEROL
lig 20
GOL
B
504 6GLYCEROL
lig 21
YJU
C
501 34 (TRIFLUOROMETHYL)PYRIDINE-2-CARBOXAMIDE
lig 22
CL
C
502 1CHLORIDE ION
lig 23
GOL
C
503 6GLYCEROL
lig 24
YJU
D
501 34 (TRIFLUOROMETHYL)PYRIDINE-2-CARBOXAMIDE
lig 25
GOL
D
502 6GLYCEROL