Analysis of Ligand-Protein Contacts in PDB entry:
8V8A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 65 ligands in PDB entry 8V8A. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 16
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 21
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 26
CA
A
601 1CALCIUM ION
lig 27
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
POV
A
603 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 29
POV
A
604 36 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 30
9Z9
A
605 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 31
EPJ
A
606 14EPIBATIDINE
lig 32
POV
A
607 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 33
I34
A
608 21 ISOXAZOLYL)-UREA
lig 34
POV
B
601 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 35
I34
B
602 21 ISOXAZOLYL)-UREA
lig 36
CA
B
603 1CALCIUM ION
lig 37
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
POV
B
605 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 39
POV
B
606 36 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 40
9Z9
B
607 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 41
EPJ
B
608 14EPIBATIDINE
lig 42
POV
C
601 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 43
I34
C
602 21 ISOXAZOLYL)-UREA
lig 44
CA
C
603 1CALCIUM ION
lig 45
NAG
C
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
POV
C
605 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 47
POV
C
606 36 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 48
9Z9
C
607 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 49
EPJ
C
608 14EPIBATIDINE
lig 50
POV
D
601 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 51
I34
D
602 21 ISOXAZOLYL)-UREA
lig 52
CA
D
603 1CALCIUM ION
lig 53
NAG
D
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
POV
D
605 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 55
POV
D
606 36 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 56
9Z9
D
607 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 57
EPJ
D
608 14EPIBATIDINE
lig 58
POV
E
601 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 59
I34
E
602 21 ISOXAZOLYL)-UREA
lig 60
CA
E
603 1CALCIUM ION
lig 61
NAG
E
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
POV
E
605 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 63
POV
E
606 36 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 64
9Z9
E
607 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 65
EPJ
E
608 14EPIBATIDINE