Analysis of Ligand-Protein Contacts in PDB entry:
8VRF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 8VRF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
B
501 1CALCIUM ION
lig 2
CA
B
502 1CALCIUM ION
lig 3
GOL
B
503 6GLYCEROL
lig 4
GOL
B
504 6GLYCEROL
lig 5
GOL
B
505 6GLYCEROL
lig 6
UPG
B
506 36URIDINE-5'-DIPHOSPHATE-GLUCOSE
lig 7
CA
A
501 1CALCIUM ION
lig 8
GOL
A
502 6GLYCEROL
lig 9
GOL
A
503 6GLYCEROL
lig 10
GOL
A
504 6GLYCEROL
lig 11
GOL
A
505 6GLYCEROL
lig 12
UPG
A
506 36URIDINE-5'-DIPHOSPHATE-GLUCOSE