Analysis of Ligand-Protein Contacts in PDB entry:
8WDU

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 123 ligands in PDB entry 8WDU. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	H	1	10	N-FORMYLMETHIONINE
lig 2	FME	A	5	10	N-FORMYLMETHIONINE
lig 3	FME	I	5	10	N-FORMYLMETHIONINE
lig 4	FME	K	5	10	N-FORMYLMETHIONINE
lig 5	FME	O	5	10	N-FORMYLMETHIONINE
lig 6	FME	Q	5	10	N-FORMYLMETHIONINE
lig 7	FME	1	5	10	N-FORMYLMETHIONINE
lig 8	FME	5	5	10	N-FORMYLMETHIONINE
lig 9	FME	7	5	10	N-FORMYLMETHIONINE
lig 10	FME	9	5	10	N-FORMYLMETHIONINE
lig 11	HEM	C	401	43	PROTOPORPHYRIN IX CONTAINING FE
lig 12	HEM	C	402	43	PROTOPORPHYRIN IX CONTAINING FE
lig 13	HEM	C	403	43	PROTOPORPHYRIN IX CONTAINING FE
lig 14	HEM	C	404	43	PROTOPORPHYRIN IX CONTAINING FE
lig 15	MG	C	405	1	MAGNESIUM ION
lig 16	Z41	C	406	35	(2S)-3-HYDROXYPROPANE-1,2-DIYL DIHEXADECAN
lig 17	PLM	C	407	12	PALMITIC ACID
lig 18	PGV	C	408	31	OCTADEC-11-ENOATE
lig 19	BCL	L	301	66	BACTERIOCHLOROPHYLL A
lig 20	BPH	L	302	65	BACTERIOPHEOPHYTIN A
lig 21	UQ8	L	303	33	UBIQUINONE-8
lig 22	UQ8	L	304	53	UBIQUINONE-8
lig 23	PGV	L	305	29	OCTADEC-11-ENOATE
lig 24	PGV	L	306	35	OCTADEC-11-ENOATE
lig 25	LMT	L	307	35	DODECYL-BETA-D-MALTOSIDE
lig 26	BCL	L	308	66	BACTERIOCHLOROPHYLL A
lig 27	UQ8	L	309	53	UBIQUINONE-8
lig 28	PGV	L	310	37	OCTADEC-11-ENOATE
lig 29	CDL	L	311	80	CARDIOLIPIN
lig 30	FE	M	401	1	FE (III) ION
lig 31	BCL	M	402	66	BACTERIOCHLOROPHYLL A
lig 32	BCL	M	403	66	BACTERIOCHLOROPHYLL A
lig 33	BPH	M	404	65	BACTERIOPHEOPHYTIN A
lig 34	MQ8	M	405	53	MENAQUINONE 8
lig 35	CRT	M	406	44	SPIRILLOXANTHIN
lig 36	CDL	M	407	39	CARDIOLIPIN
lig 37	PGV	M	408	27	OCTADEC-11-ENOATE
lig 38	CDL	M	409	95	CARDIOLIPIN
lig 39	LMT	M	410	35	DODECYL-BETA-D-MALTOSIDE
lig 40	LMT	M	411	24	DODECYL-BETA-D-MALTOSIDE
lig 41	PGV	H	301	36	OCTADEC-11-ENOATE
lig 42	CDL	H	302	79	CARDIOLIPIN
lig 43	LMT	H	303	35	DODECYL-BETA-D-MALTOSIDE
lig 44	PGV	A	501	39	OCTADEC-11-ENOATE
lig 45	BCL	A	502	66	BACTERIOCHLOROPHYLL A
lig 46	PGV	A	503	33	OCTADEC-11-ENOATE
lig 47	LMT	B	101	35	DODECYL-BETA-D-MALTOSIDE
lig 48	BCL	B	102	66	BACTERIOCHLOROPHYLL A
lig 49	CRT	B	103	44	SPIRILLOXANTHIN
lig 50	CDL	D	101	58	CARDIOLIPIN
lig 51	BCL	D	102	66	BACTERIOCHLOROPHYLL A
lig 52	CA	D	103	1	CALCIUM ION
lig 53	LMT	E	101	35	DODECYL-BETA-D-MALTOSIDE
lig 54	BCL	E	102	66	BACTERIOCHLOROPHYLL A
lig 55	CRT	E	103	44	SPIRILLOXANTHIN
lig 56	PGV	F	501	31	OCTADEC-11-ENOATE
lig 57	BCL	F	502	66	BACTERIOCHLOROPHYLL A
lig 58	CA	F	503	1	CALCIUM ION
lig 59	LMT	G	101	35	DODECYL-BETA-D-MALTOSIDE
lig 60	BCL	G	102	66	BACTERIOCHLOROPHYLL A
lig 61	CRT	G	103	44	SPIRILLOXANTHIN
lig 62	BCL	I	101	66	BACTERIOCHLOROPHYLL A
lig 63	LMT	J	101	35	DODECYL-BETA-D-MALTOSIDE
lig 64	BCL	J	102	66	BACTERIOCHLOROPHYLL A
lig 65	CRT	J	103	44	SPIRILLOXANTHIN
lig 66	LMT	J	104	35	DODECYL-BETA-D-MALTOSIDE
lig 67	LDA	K	101	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 68	BCL	K	102	66	BACTERIOCHLOROPHYLL A
lig 69	BCL	N	101	66	BACTERIOCHLOROPHYLL A
lig 70	CRT	N	102	44	SPIRILLOXANTHIN
lig 71	LDA	O	501	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 72	BCL	O	502	66	BACTERIOCHLOROPHYLL A
lig 73	LMT	P	101	35	DODECYL-BETA-D-MALTOSIDE
lig 74	BCL	P	102	66	BACTERIOCHLOROPHYLL A
lig 75	CRT	P	103	44	SPIRILLOXANTHIN
lig 76	LMT	P	104	35	DODECYL-BETA-D-MALTOSIDE
lig 77	PGV	Q	101	24	OCTADEC-11-ENOATE
lig 78	BCL	Q	102	66	BACTERIOCHLOROPHYLL A
lig 79	BCL	R	101	66	BACTERIOCHLOROPHYLL A
lig 80	CRT	R	102	44	SPIRILLOXANTHIN
lig 81	LMT	R	103	35	DODECYL-BETA-D-MALTOSIDE
lig 82	LMT	S	101	26	DODECYL-BETA-D-MALTOSIDE
lig 83	BCL	S	102	66	BACTERIOCHLOROPHYLL A
lig 84	CA	S	103	1	CALCIUM ION
lig 85	BCL	T	101	66	BACTERIOCHLOROPHYLL A
lig 86	CRT	T	102	44	SPIRILLOXANTHIN
lig 87	LMT	T	103	35	DODECYL-BETA-D-MALTOSIDE
lig 88	BCL	U	101	66	BACTERIOCHLOROPHYLL A
lig 89	CA	U	102	1	CALCIUM ION
lig 90	BCL	V	101	66	BACTERIOCHLOROPHYLL A
lig 91	CRT	V	102	44	SPIRILLOXANTHIN
lig 92	BCL	W	101	66	BACTERIOCHLOROPHYLL A
lig 93	CA	W	102	1	CALCIUM ION
lig 94	LMT	X	101	35	DODECYL-BETA-D-MALTOSIDE
lig 95	BCL	X	102	66	BACTERIOCHLOROPHYLL A
lig 96	CRT	Y	101	44	SPIRILLOXANTHIN
lig 97	BCL	Y	102	66	BACTERIOCHLOROPHYLL A
lig 98	CA	Y	103	1	CALCIUM ION
lig 99	LMT	Z	101	35	DODECYL-BETA-D-MALTOSIDE
lig 100	BCL	Z	102	66	BACTERIOCHLOROPHYLL A
lig 101	CRT	Z	103	44	SPIRILLOXANTHIN
lig 102	PGV	1	401	27	OCTADEC-11-ENOATE
lig 103	BCL	1	402	66	BACTERIOCHLOROPHYLL A
lig 104	LMT	2	101	35	DODECYL-BETA-D-MALTOSIDE
lig 105	BCL	2	102	66	BACTERIOCHLOROPHYLL A
lig 106	CRT	2	103	44	SPIRILLOXANTHIN
lig 107	BCL	3	101	66	BACTERIOCHLOROPHYLL A
lig 108	LMT	4	101	35	DODECYL-BETA-D-MALTOSIDE
lig 109	BCL	4	102	66	BACTERIOCHLOROPHYLL A
lig 110	CRT	4	103	44	SPIRILLOXANTHIN
lig 111	LMT	4	104	35	DODECYL-BETA-D-MALTOSIDE
lig 112	LMT	5	101	31	DODECYL-BETA-D-MALTOSIDE
lig 113	BCL	5	102	66	BACTERIOCHLOROPHYLL A
lig 114	BCL	6	101	66	BACTERIOCHLOROPHYLL A
lig 115	CRT	6	102	44	SPIRILLOXANTHIN
lig 116	BCL	7	101	61	BACTERIOCHLOROPHYLL A
lig 117	LMT	8	101	35	DODECYL-BETA-D-MALTOSIDE
lig 118	BCL	8	102	66	BACTERIOCHLOROPHYLL A
lig 119	LMT	8	103	35	DODECYL-BETA-D-MALTOSIDE
lig 120	CRT	9	101	44	SPIRILLOXANTHIN
lig 121	BCL	9	102	66	BACTERIOCHLOROPHYLL A
lig 122	BCL	0	101	66	BACTERIOCHLOROPHYLL A
lig 123	CRT	0	102	44	SPIRILLOXANTHIN

Analysis of Ligand-Protein Contacts in PDB entry: 8WDU

Analysis of Ligand-Protein Contacts in PDB entry:
8WDU