Analysis of Ligand-Protein Contacts in PDB entry:
8Y9X


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 8Y9X. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
CA
A
602 1CALCIUM ION
lig 3
IOD
A
603 1IODIDE ION
lig 4
IOD
A
604 1IODIDE ION
lig 5
IOD
A
605 1IODIDE ION
lig 6
IOD
A
606 1IODIDE ION
lig 7
IOD
A
607 1IODIDE ION
lig 8
IOD
A
608 1IODIDE ION
lig 9
IOD
A
609 1IODIDE ION
lig 10
IOD
A
610 1IODIDE ION
lig 11
BR
A
611 1BROMIDE ION
lig 12
CL
A
612 1CHLORIDE ION
lig 13
IOD
A
613 1IODIDE ION
lig 14
PEG
A
614 7DI(HYDROXYETHYL)ETHER
lig 15
PEG
A
615 7DI(HYDROXYETHYL)ETHER
lig 16
PEG
A
616 7DI(HYDROXYETHYL)ETHER
lig 17
PEG
A
617 7DI(HYDROXYETHYL)ETHER
lig 18
PEG
A
618 7DI(HYDROXYETHYL)ETHER
lig 19
PEG
A
619 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
A
620 7DI(HYDROXYETHYL)ETHER
lig 21
SCN
A
621 3THIOCYANATE ION
lig 22
SCN
A
622 3THIOCYANATE ION
lig 23
SCN
A
623 3THIOCYANATE ION
lig 24
SCN
A
624 3THIOCYANATE ION
lig 25
NAG
A
625 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
626 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
A
627 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
A
628 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
A
629 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
A
630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
SCN
A
631 3THIOCYANATE ION
lig 32
IOD
A
632 1IODIDE ION
lig 33
IOD
A
633 1IODIDE ION