Analysis of Ligand-Protein Contacts in PDB entry:
8AP2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 8AP2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
601 8IRON/SULFUR CLUSTER
lig 2
SF4
A
602 8IRON/SULFUR CLUSTER
lig 3
SF4
A
603 8IRON/SULFUR CLUSTER
lig 4
SF4
A
604 8IRON/SULFUR CLUSTER
lig 5
FES
A
605 4FE2/S2 (INORGANIC) CLUSTER
lig 6
GOL
A
606 6GLYCEROL
lig 7
CL
A
607 1CHLORIDE ION
lig 8
MG
A
608 1MAGNESIUM ION
lig 9
MG
A
609 1MAGNESIUM ION
lig 10
MG
A
610 1MAGNESIUM ION
lig 11
MG
A
611 1MAGNESIUM ION
lig 12
VHR
A
612 19 CYANIDE CLUSTER (-CN FORM)
lig 13
SF4
B
601 8IRON/SULFUR CLUSTER
lig 14
SF4
B
602 8IRON/SULFUR CLUSTER
lig 15
SF4
B
603 8IRON/SULFUR CLUSTER
lig 16
SF4
B
604 8IRON/SULFUR CLUSTER
lig 17
FES
B
605 4FE2/S2 (INORGANIC) CLUSTER
lig 18
MG
B
606 1MAGNESIUM ION
lig 19
GOL
B
607 6GLYCEROL
lig 20
CL
B
608 1CHLORIDE ION
lig 21
CL
B
609 1CHLORIDE ION
lig 22
MG
B
610 1MAGNESIUM ION
lig 23
MG
B
611 1MAGNESIUM ION
lig 24
MG
B
612 1MAGNESIUM ION
lig 25
VHR
B
613 19 CYANIDE CLUSTER (-CN FORM)