Analysis of Ligand-Protein Contacts in PDB entry:
8AQ4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 8AQ4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PG5
A
601 101-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
lig 2
GOL
A
602 6GLYCEROL
lig 3
GOL
A
603 6GLYCEROL
lig 4
PG5
A
604 101-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
lig 5
GOL
A
605 6GLYCEROL
lig 6
6OU
A
606 49 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 7
QGT
A
607 16~{N}-TRIDECYLMETHANETHIOAMIDE
lig 8
6OU
A
608 32 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 9
6OU
A
609 49 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 10
PG5
A
610 101-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
lig 11
PG5
A
611 101-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
lig 12
PG6
A
612 11 ETHOXY}-ETHANE
lig 13
TRS
A
613 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 14
ACT
A
614 4ACETATE ION
lig 15
GOL
A
615 6GLYCEROL
lig 16
GOL
A
616 6GLYCEROL
lig 17
GOL
A
617 6GLYCEROL
lig 18
LMT
A
618 12DODECYL-BETA-D-MALTOSIDE
lig 19
LMT
A
619 12DODECYL-BETA-D-MALTOSIDE
lig 20
LMT
A
620 35DODECYL-BETA-D-MALTOSIDE
lig 21
CL
A
621 1CHLORIDE ION
lig 22
CL
A
622 1CHLORIDE ION