Analysis of Ligand-Protein Contacts in PDB entry:
8AV5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 8AV5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
D
9 11ALPHA-D-MANNOPYRANOSE
lig 15
MG
A
401 1MAGNESIUM ION
lig 16
CL
A
402 1CHLORIDE ION
lig 17
NAG
A
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
HEM
A
404 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
ACT
A
405 4ACETATE ION