Analysis of Ligand-Protein Contacts in PDB entry:
8AVU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 8AVU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MED
B
1 8D-METHIONINE
lig 2
DSN
B
2 6D-SERINE
lig 3
DTR
B
3 14D-TRYPTOPHAN
lig 4
DLE
B
4 8D-LEUCINE
lig 5
DSG
B
5 8D-ASPARAGINE
lig 6
DPN
B
6 11D-PHENYLALANINE
lig 7
DLE
B
7 8D-LEUCINE
lig 8
DLY
B
8 9D-LYSINE
lig 9
DTY
B
9 12D-TYROSINE
lig 10
DIL
B
10 8D-ISOLEUCINE
lig 11
DAL
B
11 5D-ALANINE
lig 12
DLY
B
12 9D-LYSINE
lig 13
DTY
B
13 12D-TYROSINE
lig 14
DLY
B
15 9D-LYSINE
lig 15
DLY
B
16 9D-LYSINE
lig 16
DAL
B
17 5D-ALANINE
lig 17
DVA
B
18 7D-VALINE
lig 18
DSN
B
19 6D-SERINE
lig 19
DAL
B
20 5D-ALANINE
lig 20
DAL
B
21 5D-ALANINE
lig 21
DTR
B
22 14D-TRYPTOPHAN
lig 22
DLY
B
23 9D-LYSINE
lig 23
DTY
B
24 12D-TYROSINE
lig 24
DLY
B
25 9D-LYSINE
lig 25
DLY
B
27 9D-LYSINE
lig 26
DVA
B
28 7D-VALINE
lig 27
DLE
B
29 8D-LEUCINE
lig 28
DGL
B
30 9D-GLUTAMIC ACID
lig 29
DTR
B
31 14D-TRYPTOPHAN
lig 30
DLE
B
32 8D-LEUCINE
lig 31
DSG
B
33 8D-ASPARAGINE
lig 32
DVA
B
34 7D-VALINE
lig 33
DPR
B
36 7D-PROLINE
lig 34
DTH
B
37 7D-THREONINE
lig 35
DLE
B
38 8D-LEUCINE
lig 36
DGL
B
39 9D-GLUTAMIC ACID
lig 37
DTR
B
40 14D-TRYPTOPHAN
lig 38
DVA
B
41 7D-VALINE
lig 39
DTR
B
42 14D-TRYPTOPHAN
lig 40
DGN
B
43 9D-GLUTAMINE
lig 41
DLY
B
44 9D-LYSINE
lig 42
DLE
B
45 8D-LEUCINE
lig 43
DLY
B
46 9D-LYSINE
lig 44
DLY
B
47 9D-LYSINE
lig 45
DIL
B
48 8D-ISOLEUCINE
lig 46
DAL
B
49 5D-ALANINE
lig 47
DLE
B
51 9D-LEUCINE
lig 48
EDO
A
101 41,2-ETHANEDIOL
lig 49
EDO
A
102 41,2-ETHANEDIOL
lig 50
PEG
A
103 7DI(HYDROXYETHYL)ETHER
lig 51
PEG
A
104 7DI(HYDROXYETHYL)ETHER
lig 52
PEG
A
105 7DI(HYDROXYETHYL)ETHER
lig 53
PEG
A
106 7DI(HYDROXYETHYL)ETHER
lig 54
PEG
B
101 7DI(HYDROXYETHYL)ETHER
lig 55
EDO
B
102 41,2-ETHANEDIOL