Analysis of Ligand-Protein Contacts in PDB entry:
8B5D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 8B5D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MPD
A
401 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 2
GOL
A
402 6GLYCEROL
lig 3
GOL
A
403 6GLYCEROL
lig 4
GLN
A
404 10GLUTAMINE
lig 5
NA
A
405 1SODIUM ION
lig 6
NA
A
406 1SODIUM ION
lig 7
GOL
B
401 6GLYCEROL
lig 8
PEG
B
402 7DI(HYDROXYETHYL)ETHER
lig 9
GOL
B
403 6GLYCEROL
lig 10
GLN
B
404 10GLUTAMINE
lig 11
NA
B
405 1SODIUM ION
lig 12
NA
B
406 1SODIUM ION