Analysis of Ligand-Protein Contacts in PDB entry:
8B9Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 8B9Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MR
D
123 13N3, N4-DIMETHYLARGININE
lig 2
PC1
A
201 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 3
3PE
A
202 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 4
3PE
A
203 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 5
SF4
B
301 8IRON/SULFUR CLUSTER
lig 6
3PE
B
302 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 7
CDL
B
303 67CARDIOLIPIN
lig 8
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 9
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 10
SF4
F
502 8IRON/SULFUR CLUSTER
lig 11
SF4
G
801 8IRON/SULFUR CLUSTER
lig 12
SF4
G
802 8IRON/SULFUR CLUSTER
lig 13
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 14
NA
G
804 1SODIUM ION
lig 15
UQ9
H
501 58UBIQUINONE-9
lig 16
3PE
H
502 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
SF4
I
301 8IRON/SULFUR CLUSTER
lig 18
SF4
I
302 8IRON/SULFUR CLUSTER
lig 19
PC1
J
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
3PE
J
202 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 21
3PE
J
203 241,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
3PE
L
601 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 23
3PE
L
602 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
3PE
L
603 251,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
3PE
M
501 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
3PE
N
401 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
DGT
O
501 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 28
NDP
P
501 48 PHOSPHATE
lig 29
CDL
P
502 54CARDIOLIPIN
lig 30
ZN
R
201 1ZINC ION
lig 31
EHZ
T
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 32
EHZ
U
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 33
3PE
X
201 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
Y
301 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
3PE
Y
302 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
3PE
Y
303 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
d
201 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
CDL
h
201 69CARDIOLIPIN
lig 39
CDL
h
202 60CARDIOLIPIN
lig 40
PC1
i
201 341,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE