Analysis of Ligand-Protein Contacts in PDB entry:
8BEF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 8BEF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
FME
K
1 10N-FORMYLMETHIONINE
lig 3
FME
f
1 10N-FORMYLMETHIONINE
lig 4
PGT
A
201 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 5
UQ9
H
401 35UBIQUINONE-9
lig 6
PTY
H
402 50PHOSPHATIDYLETHANOLAMINE
lig 7
Q7G
H
403 81 GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSIDE
lig 8
Q7G
K
201 81 GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSIDE
lig 9
PGT
L
701 36 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 10
PGT
L
702 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 11
PTY
L
703 31PHOSPHATIDYLETHANOLAMINE
lig 12
PGT
M
501 29 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 13
PTY
M
502 37PHOSPHATIDYLETHANOLAMINE
lig 14
PTY
M
503 50PHOSPHATIDYLETHANOLAMINE
lig 15
Q7G
M
504 39 GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSIDE
lig 16
PTY
N
501 40PHOSPHATIDYLETHANOLAMINE
lig 17
PTY
N
502 39PHOSPHATIDYLETHANOLAMINE
lig 18
PTY
N
503 45PHOSPHATIDYLETHANOLAMINE
lig 19
PTY
N
504 50PHOSPHATIDYLETHANOLAMINE
lig 20
FE
O
200 1FE (III) ION
lig 21
PTY
Y
201 50PHOSPHATIDYLETHANOLAMINE
lig 22
UQ5
Y
202 38 EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZO
lig 23
Q7G
a
101 39 GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSIDE
lig 24
PC7
d
101 52 OXIDE
lig 25
3PH
f
201 411,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 26
3PH
f
202 431,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 27
PC7
f
203 48 OXIDE
lig 28
CDL
u
101 100CARDIOLIPIN
lig 29
CDL
u
102 100CARDIOLIPIN
lig 30
PC7
v
201 52 OXIDE
lig 31
ZN
y
301 1ZINC ION
lig 32
BCO
y
302 53BUTYRYL COENZYME A
lig 33
PGT
y
303 41 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 34
PTY
z
301 50PHOSPHATIDYLETHANOLAMINE