Analysis of Ligand-Protein Contacts in PDB entry:
8BY3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 8BY3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
E
8 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 17
NI
A
200 1NICKEL (II) ION
lig 18
NI
B
201 1NICKEL (II) ION
lig 19
NI
C
200 1NICKEL (II) ION
lig 20
NI
D
201 1NICKEL (II) ION
lig 21
SO4
D
202 5SULFATE ION
lig 22
SO4
D
203 5SULFATE ION