Analysis of Ligand-Protein Contacts in PDB entry:
8CA5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 8CA5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
SF4
B
201 8IRON/SULFUR CLUSTER
lig 10
PC1
B
202 411,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
3PE
D
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 12
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 13
SF4
F
501 8IRON/SULFUR CLUSTER
lig 14
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 15
SF4
G
801 8IRON/SULFUR CLUSTER
lig 16
SF4
G
802 8IRON/SULFUR CLUSTER
lig 17
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 18
UQ9
H
401 45UBIQUINONE-9
lig 19
3PE
H
402 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 20
SF4
I
201 8IRON/SULFUR CLUSTER
lig 21
SF4
I
202 8IRON/SULFUR CLUSTER
lig 22
PC1
J
201 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
3PE
K
201 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
3PE
L
701 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
CDL
L
702 74CARDIOLIPIN
lig 26
3PE
L
703 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
LMT
L
704 35DODECYL-BETA-D-MALTOSIDE
lig 28
LMT
L
705 35DODECYL-BETA-D-MALTOSIDE
lig 29
3PE
M
501 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
M
502 59CARDIOLIPIN
lig 31
CDL
N
401 65CARDIOLIPIN
lig 32
GTP
O
401 31GUANOSINE-5'-TRIPHOSPHATE
lig 33
NDP
P
501 48 PHOSPHATE
lig 34
EHZ
T
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 35
EHZ
U
201 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 36
3PE
Y
401 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
CDL
d
201 67CARDIOLIPIN
lig 38
CDL
d
202 63CARDIOLIPIN
lig 39
CDL
i
201 70CARDIOLIPIN