Analysis of Ligand-Protein Contacts in PDB entry:
8CAD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 78 ligands in PDB entry 8CAD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
H
8 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
H
9 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
J
8 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
J
9 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
L
7 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
L
8 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
L
9 11ALPHA-D-MANNOPYRANOSE
lig 34
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 39
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 40
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
N
8 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
N
9 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 50
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 51
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 54
MAN
P
8 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
P
9 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 61
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 62
MAN
R
5 11ALPHA-D-MANNOPYRANOSE
lig 63
MAN
R
6 11ALPHA-D-MANNOPYRANOSE
lig 64
MAN
R
7 11ALPHA-D-MANNOPYRANOSE
lig 65
MAN
R
8 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
R
9 11ALPHA-D-MANNOPYRANOSE
lig 67
CU
A
900 1COPPER (II) ION
lig 68
CU
A
901 1COPPER (II) ION
lig 69
CU
B
900 1COPPER (II) ION
lig 70
CU
B
901 1COPPER (II) ION
lig 71
CU
C
900 1COPPER (II) ION
lig 72
CU
C
901 1COPPER (II) ION
lig 73
CU
D
900 1COPPER (II) ION
lig 74
CU
D
901 1COPPER (II) ION
lig 75
CU
E
900 1COPPER (II) ION
lig 76
CU
E
901 1COPPER (II) ION
lig 77
CU
F
900 1COPPER (II) ION
lig 78
CU
F
901 1COPPER (II) ION