Analysis of Ligand-Protein Contacts in PDB entry:
8CB6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 8CB6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
A
938 7S-HYDROXYCYSTEINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
CL
F
301 1CHLORIDE ION
lig 13
CL
F
302 1CHLORIDE ION
lig 14
CL
F
303 1CHLORIDE ION
lig 15
EDO
F
304 41,2-ETHANEDIOL
lig 16
GOL
F
305 6GLYCEROL
lig 17
EDO
F
306 41,2-ETHANEDIOL
lig 18
EDO
F
307 41,2-ETHANEDIOL
lig 19
U54
A
1001 30 TRIOL
lig 20
NAG
A
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
SO4
A
1003 5SULFATE ION
lig 22
SO4
A
1004 5SULFATE ION
lig 23
SO4
A
1005 5SULFATE ION
lig 24
SO4
A
1006 5SULFATE ION
lig 25
CL
A
1007 1CHLORIDE ION
lig 26
CL
A
1008 1CHLORIDE ION
lig 27
CL
A
1009 1CHLORIDE ION
lig 28
CL
A
1010 1CHLORIDE ION
lig 29
CL
A
1011 1CHLORIDE ION
lig 30
CL
A
1012 1CHLORIDE ION
lig 31
CL
A
1013 1CHLORIDE ION
lig 32
EDO
A
1014 41,2-ETHANEDIOL
lig 33
EDO
A
1015 41,2-ETHANEDIOL
lig 34
EDO
A
1016 41,2-ETHANEDIOL
lig 35
GOL
A
1017 6GLYCEROL
lig 36
EDO
A
1018 41,2-ETHANEDIOL
lig 37
GOL
A
1019 6GLYCEROL
lig 38
GOL
A
1020 6GLYCEROL
lig 39
EDO
A
1021 41,2-ETHANEDIOL
lig 40
EDO
A
1022 41,2-ETHANEDIOL
lig 41
EDO
A
1023 41,2-ETHANEDIOL
lig 42
PGE
A
1024 10TRIETHYLENE GLYCOL