Analysis of Ligand-Protein Contacts in PDB entry:
8CDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 13 ligands in PDB entry 8CDQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
19 10PHOSPHOSERINE
lig 2
GOL
A
901 6GLYCEROL
lig 3
GOL
A
902 6GLYCEROL
lig 4
GOL
A
903 6GLYCEROL
lig 5
SO4
A
904 5SULFATE ION
lig 6
GOL
A
905 6GLYCEROL
lig 7
EDO
A
906 41,2-ETHANEDIOL
lig 8
PG4
A
907 13TETRAETHYLENE GLYCOL
lig 9
EDO
A
908 41,2-ETHANEDIOL
lig 10
AGS
A
909 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 11
MG
A
910 1MAGNESIUM ION
lig 12
KQ0
A
911 23 PYRAZOL-4-YL)METHYL]CYCLOPROPAN-1-AMINE
lig 13
SO4
C
201 5SULFATE ION