Analysis of Ligand-Protein Contacts in PDB entry:
8CM4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 8CM4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MGD
A
1101 47 DINUCLEOTIDE
lig 2
MGD
A
1102 47 DINUCLEOTIDE
lig 3
SF4
A
1103 8IRON/SULFUR CLUSTER
lig 4
GOL
A
1104 6GLYCEROL
lig 5
W
A
1105 1TUNGSTEN ION
lig 6
GOL
A
1106 6GLYCEROL
lig 7
GOL
A
1107 6GLYCEROL
lig 8
H2S
A
1108 1HYDROSULFURIC ACID
lig 9
SF4
B
301 8IRON/SULFUR CLUSTER
lig 10
SF4
B
302 8IRON/SULFUR CLUSTER
lig 11
SF4
B
303 8IRON/SULFUR CLUSTER
lig 12
NO3
B
304 4NITRATE ION
lig 13
MGD
C
1101 47 DINUCLEOTIDE
lig 14
MGD
C
1102 47 DINUCLEOTIDE
lig 15
SF4
C
1103 8IRON/SULFUR CLUSTER
lig 16
GOL
C
1104 6GLYCEROL
lig 17
W
C
1105 1TUNGSTEN ION
lig 18
H2S
C
1106 1HYDROSULFURIC ACID
lig 19
SF4
D
301 8IRON/SULFUR CLUSTER
lig 20
SF4
D
302 8IRON/SULFUR CLUSTER
lig 21
SF4
D
303 8IRON/SULFUR CLUSTER
lig 22
PEG
D
304 7DI(HYDROXYETHYL)ETHER