Analysis of Ligand-Protein Contacts in PDB entry:
8CM6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 8CM6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
H2S
A
1101 1HYDROSULFURIC ACID
lig 2
W
A
1102 1TUNGSTEN ION
lig 3
MGD
A
1103 47 DINUCLEOTIDE
lig 4
MGD
A
1104 47 DINUCLEOTIDE
lig 5
SF4
A
1105 8IRON/SULFUR CLUSTER
lig 6
CL
A
1106 1CHLORIDE ION
lig 7
GOL
A
1107 6GLYCEROL
lig 8
GOL
A
1108 6GLYCEROL
lig 9
GOL
A
1109 6GLYCEROL
lig 10
PG4
A
1110 13TETRAETHYLENE GLYCOL
lig 11
GOL
A
1111 6GLYCEROL
lig 12
PG4
A
1112 13TETRAETHYLENE GLYCOL
lig 13
GOL
A
1113 6GLYCEROL
lig 14
GOL
A
1114 6GLYCEROL
lig 15
GOL
A
1115 6GLYCEROL
lig 16
PEG
A
1116 7DI(HYDROXYETHYL)ETHER
lig 17
GOL
A
1117 6GLYCEROL
lig 18
GOL
A
1118 6GLYCEROL
lig 19
ARF
A
1119 3FORMAMIDE
lig 20
ARF
A
1120 3FORMAMIDE
lig 21
SF4
B
301 8IRON/SULFUR CLUSTER
lig 22
SF4
B
302 8IRON/SULFUR CLUSTER
lig 23
SF4
B
303 8IRON/SULFUR CLUSTER
lig 24
CL
B
304 1CHLORIDE ION
lig 25
ARF
B
305 3FORMAMIDE
lig 26
PG4
B
306 13TETRAETHYLENE GLYCOL
lig 27
EDO
B
307 41,2-ETHANEDIOL
lig 28
H2S
C
1101 1HYDROSULFURIC ACID
lig 29
W
C
1102 1TUNGSTEN ION
lig 30
MGD
C
1103 47 DINUCLEOTIDE
lig 31
MGD
C
1104 47 DINUCLEOTIDE
lig 32
SF4
C
1105 8IRON/SULFUR CLUSTER
lig 33
GOL
C
1106 6GLYCEROL
lig 34
PEG
C
1107 7DI(HYDROXYETHYL)ETHER
lig 35
PG4
C
1108 13TETRAETHYLENE GLYCOL
lig 36
GOL
C
1109 6GLYCEROL
lig 37
GOL
C
1110 6GLYCEROL
lig 38
GOL
C
1111 6GLYCEROL
lig 39
GOL
C
1112 6GLYCEROL
lig 40
ARF
C
1113 3FORMAMIDE
lig 41
ARF
C
1114 3FORMAMIDE
lig 42
ARF
C
1115 3FORMAMIDE
lig 43
ARF
C
1116 3FORMAMIDE
lig 44
SF4
D
301 8IRON/SULFUR CLUSTER
lig 45
SF4
D
302 8IRON/SULFUR CLUSTER
lig 46
SF4
D
303 8IRON/SULFUR CLUSTER
lig 47
CL
D
304 1CHLORIDE ION
lig 48
EDO
D
305 41,2-ETHANEDIOL