Analysis of Ligand-Protein Contacts in PDB entry:
8D1F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 8D1F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
C
501 1CALCIUM ION
lig 2
DU0
C
502 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 3
MC3
C
503 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 4
MC3
C
504 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 5
MC3
C
505 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 6
MC3
C
506 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 7
MC3
C
507 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 8
MC3
C
508 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 9
MC3
C
509 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 10
MC3
C
510 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 11
MC3
C
511 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 12
MC3
C
512 81,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 13
CA
E
501 1CALCIUM ION
lig 14
DU0
E
502 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 15
MC3
E
503 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 16
MC3
E
504 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 17
MC3
E
505 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 18
MC3
E
506 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 19
MC3
E
507 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 20
MC3
E
508 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 21
MC3
E
509 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 22
MC3
E
510 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 23
MC3
E
511 81,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 24
MC3
A
501 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 25
CA
A
502 1CALCIUM ION
lig 26
DU0
A
503 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 27
MC3
A
504 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 28
MC3
A
505 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 29
MC3
A
506 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 30
MC3
A
507 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 31
MC3
A
508 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 32
MC3
A
509 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 33
MC3
A
510 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 34
MC3
A
511 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 35
MC3
A
512 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 36
MC3
A
513 81,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 37
CL
A
514 1CHLORIDE ION
lig 38
CA
D
501 1CALCIUM ION
lig 39
DU0
D
502 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 40
MC3
D
503 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 41
MC3
D
504 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 42
MC3
D
505 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 43
MC3
D
506 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 44
MC3
D
507 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 45
MC3
D
508 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 46
MC3
D
509 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 47
MC3
D
510 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 48
MC3
D
511 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 49
MC3
D
512 81,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 50
CA
B
501 1CALCIUM ION
lig 51
DU0
B
502 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 52
MC3
B
503 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 53
MC3
B
504 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 54
MC3
B
505 401,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 55
MC3
B
506 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 56
MC3
B
507 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 57
MC3
B
508 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 58
MC3
B
509 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 59
MC3
B
510 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 60
MC3
B
511 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 61
MC3
B
512 81,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI