Analysis of Ligand-Protein Contacts in PDB entry:
8D1O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 8D1O. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MC3
E
601 51,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 2
MC3
E
602 381,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 3
MC3
E
603 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 4
MC3
E
604 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 5
MC3
E
605 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 6
MC3
E
606 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 7
CA
E
607 1CALCIUM ION
lig 8
MC3
E
608 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 9
MC3
E
609 351,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 10
MC3
A
401 351,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 11
MC3
A
402 51,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 12
MC3
A
403 381,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 13
MC3
A
404 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 14
MC3
A
405 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 15
MC3
A
406 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 16
MC3
A
407 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 17
CA
A
408 1CALCIUM ION
lig 18
MC3
A
409 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 19
MC3
B
401 351,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 20
MC3
B
402 51,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 21
MC3
B
403 381,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 22
MC3
B
404 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 23
MC3
B
405 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 24
MC3
B
406 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 25
MC3
B
407 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 26
CA
B
408 1CALCIUM ION
lig 27
MC3
B
409 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 28
MC3
C
401 351,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 29
MC3
C
402 51,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 30
MC3
C
403 381,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 31
MC3
C
404 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 32
MC3
C
405 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 33
MC3
C
406 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 34
MC3
C
407 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 35
CA
C
408 1CALCIUM ION
lig 36
MC3
C
409 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 37
MC3
D
401 351,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 38
MC3
D
402 51,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 39
MC3
D
403 381,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 40
MC3
D
404 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 41
MC3
D
405 121,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 42
MC3
D
406 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 43
MC3
D
407 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 44
CA
D
408 1CALCIUM ION
lig 45
MC3
D
409 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI